WormBase Tree Display for Variation: WBVar00151657
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WBVar00151657 | Evidence | Paper_evidence | WBPaper00037807 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00151657 | |||
Other_name | haw4907 | ||||
cewivar00164265 | |||||
Y54E10BR.8.1:c.451+254A>G | |||||
Y54E10BR.1b.1:c.-1174T>C | |||||
HGVSg | CHROMOSOME_I:g.3058140T>C | ||||
Sequence_details | SMap | S_parent | Sequence | Y54E10BR | |
Flanking_sequences | tcaattttctgttttctgtggtttt | tttgtttaaaaaaatttaaaaactg | |||
Mapping_target | Y54E10BR | ||||
Type_of_mutation | Substitution | T | C | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | WGS_De_Bono | ||
WGS_Hawaiian_Waterston | |||||
Million_mutation_project_reanalysis | |||||
Laboratory | RW | ||||
AX | |||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_De_Bono | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar01341691 | |||
Status | Live | ||||
Affects | Gene | WBGene00021840 | |||
WBGene00021846 | |||||
Transcript | Y54E10BR.8.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | Y54E10BR.8.1:c.451+254A>G | ||||
Intron_number | 6/13 | ||||
Y54E10BR.1b.1 | VEP_consequence | 5_prime_UTR_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y54E10BR.1b.1:c.-1174T>C | ||||
cDNA_position | 447 | ||||
Exon_number | 1/15 | ||||
Reference | WBPaper00037807 | ||||
Remark | [20081124 db] this Variation was previously named hw4907 | ||||
Method | WGS_Hawaiian_Waterston |