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WormBase Tree Display for Variation: WBVar00150415

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Name Class

WBVar00150415EvidencePaper_evidenceWBPaper00037807
NamePublic_nameWBVar00150415
Other_namehaw3665
cewivar00162874
Y39G10AR.18b.2:c.1360+1080T>A
Y39G10AR.18c.1:c.691+1080T>A
Y39G10AR.18b.1:c.1360+1080T>A
Y39G10AR.18a.1:c.2440+1080T>A
HGVSgCHROMOSOME_I:g.2387077A>T
Sequence_detailsSMapS_parentSequenceY39G10AR
Flanking_sequencesttgttccggaaaaaacgaaaaaaaatttttttcataaaaattcaatttct
Mapping_targetY39G10AR
Type_of_mutationSubstitutionAT
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisWGS_De_Bono
WGS_Hawaiian_Waterston
Million_mutation_project_reanalysis
LaboratoryRW
AX
PersonWBPerson1562
AnalysisWGS_Hawaiian_Waterston
WGS_De_Bono
Million_mutation_project_reanalysis
HistoryAcquires_mergeWBVar01333417
StatusLive
AffectsGeneWBGene00021474
TranscriptY39G10AR.18a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY39G10AR.18a.1:c.2440+1080T>A
Intron_number14/16
Y39G10AR.18b.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY39G10AR.18b.2:c.1360+1080T>A
Intron_number6/7
Y39G10AR.18b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY39G10AR.18b.1:c.1360+1080T>A
Intron_number6/8
Y39G10AR.18c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY39G10AR.18c.1:c.691+1080T>A
Intron_number2/2
ReferenceWBPaper00037807
Remark[20081124 db] this Variation was previously named hw3665
MethodWGS_Hawaiian_Waterston