WormBase Tree Display for Variation: WBVar00150415
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WBVar00150415 | Evidence | Paper_evidence | WBPaper00037807 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00150415 | |||
Other_name | haw3665 | ||||
cewivar00162874 | |||||
Y39G10AR.18b.2:c.1360+1080T>A | |||||
Y39G10AR.18c.1:c.691+1080T>A | |||||
Y39G10AR.18b.1:c.1360+1080T>A | |||||
Y39G10AR.18a.1:c.2440+1080T>A | |||||
HGVSg | CHROMOSOME_I:g.2387077A>T | ||||
Sequence_details | SMap | S_parent | Sequence | Y39G10AR | |
Flanking_sequences | ttgttccggaaaaaacgaaaaaaaa | tttttttcataaaaattcaatttct | |||
Mapping_target | Y39G10AR | ||||
Type_of_mutation | Substitution | A | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | WGS_De_Bono | ||
WGS_Hawaiian_Waterston | |||||
Million_mutation_project_reanalysis | |||||
Laboratory | RW | ||||
AX | |||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_De_Bono | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar01333417 | |||
Status | Live | ||||
Affects | Gene | WBGene00021474 | |||
Transcript | Y39G10AR.18a.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | Y39G10AR.18a.1:c.2440+1080T>A | ||||
Intron_number | 14/16 | ||||
Y39G10AR.18b.2 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y39G10AR.18b.2:c.1360+1080T>A | ||||
Intron_number | 6/7 | ||||
Y39G10AR.18b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y39G10AR.18b.1:c.1360+1080T>A | ||||
Intron_number | 6/8 | ||||
Y39G10AR.18c.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y39G10AR.18c.1:c.691+1080T>A | ||||
Intron_number | 2/2 | ||||
Reference | WBPaper00037807 | ||||
Remark | [20081124 db] this Variation was previously named hw3665 | ||||
Method | WGS_Hawaiian_Waterston |