WormBase Tree Display for Variation: WBVar00150407

WBVar00150407 Evidence: Paper_evidence: WBPaper00004703
  Name: Public_name: WBVar00150407
    Other_name: snp_Y39G10AR[6]
      haw3657
      cewivar00162864
      Y39G10AR.18a.1:c.*228G>C
      Y39G10AR.18b.2:c.*1368G>C
      Y39G10AR.18b.1:c.*228G>C
    HGVSg: CHROMOSOME_I:g.2383223C>G
  Sequence_details: SMap: S_parent: Sequence: Y39G10AR
    Flanking_sequences: ttttttttgtagatcaacgtagatcaagccgaaatgagacactctgacaccacgt agaattgaattgaaagaatttttcg
    Mapping_target: Y39G10AR
    Type_of_mutation: Substitution: C G
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00004602 From_analysis: SNP_Wicks
          WGS_Hawaiian_Waterston
          Million_mutation_project_reanalysis
    Laboratory: RW
    Person: WBPerson1562
    Analysis: WGS_Hawaiian_Waterston
      Million_mutation_project_reanalysis
      SNP_Wicks
    History: Acquires_merge: WBVar00247096
    Status: Live
  Affects: Gene: WBGene00021474
    Transcript: Y39G10AR.18a.1 VEP_consequence: 3_prime_UTR_variant
        VEP_impact: MODIFIER
        HGVSc: Y39G10AR.18a.1:c.*228G>C
        cDNA_position: 3073
        Exon_number: 17/17
      Y39G10AR.18b.2 VEP_consequence: 3_prime_UTR_variant
        VEP_impact: MODIFIER
        HGVSc: Y39G10AR.18b.2:c.*1368G>C
        cDNA_position: 3189
        Exon_number: 8/8
      Y39G10AR.18b.1 VEP_consequence: 3_prime_UTR_variant
        VEP_impact: MODIFIER
        HGVSc: Y39G10AR.18b.1:c.*228G>C
        cDNA_position: 2049
        Exon_number: 9/9
  Reference: WBPaper00004703
  Remark: [20081124 db] this Variation was previously named hw3657
  Method: WGS_Hawaiian_Waterston