WormBase Tree Display for Variation: WBVar00150062
expand all nodes | collapse all nodes | view schema
WBVar00150062 | Evidence | Paper_evidence | WBPaper00037807 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00150062 | |||
Other_name | haw3312 | ||||
cewivar00162620 | |||||
W03F11.6a.1:c.129+189G>A | |||||
W03F11.6c.1:c.129+189G>A | |||||
W03F11.6d.1:c.129+189G>A | |||||
W03F11.6f.1:c.129+189G>A | |||||
HGVSg | CHROMOSOME_I:g.2160388G>A | ||||
Sequence_details | SMap | S_parent | Sequence | W03F11 | |
Flanking_sequences | aattttgcagaaaaaattaccgacc | aaaattataatgaatttttctgtta | |||
Mapping_target | W03F11 | ||||
Type_of_mutation | Substitution | G | A | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (19) | |||||
Laboratory | RW | ||||
AX | |||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_De_Bono | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar01419198 | |||
WBVar01278872 | |||||
WBVar01328461 | |||||
Status | Live | ||||
Affects | Gene | WBGene00021009 | |||
Transcript | W03F11.6f.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | W03F11.6f.1:c.129+189G>A | ||||
Intron_number | 2/21 | ||||
W03F11.6a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | W03F11.6a.1:c.129+189G>A | ||||
Intron_number | 2/21 | ||||
W03F11.6d.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | W03F11.6d.1:c.129+189G>A | ||||
Intron_number | 2/21 | ||||
W03F11.6c.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | W03F11.6c.1:c.129+189G>A | ||||
Intron_number | 2/21 | ||||
Reference | WBPaper00037807 | ||||
Remark | [20081124 db] this Variation was previously named hw3312 | ||||
Method | WGS_Hawaiian_Waterston |