WormBase Tree Display for Variation: WBVar00149741
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| WBVar00149741 | Evidence | Paper_evidence | WBPaper00037807 | ||
|---|---|---|---|---|---|
| Name | Public_name | WBVar00149741 | |||
| Other_name | haw2991 | ||||
| cewivar00134015 | |||||
| Y51F10.4a.1:c.1038+56A>T | |||||
| Y51F10.4b.1:c.520-2158A>T | |||||
| Y51F10.4c.1:c.408+56A>T | |||||
| HGVSg | CHROMOSOME_I:g.1938973A>T | ||||
| Sequence_details | SMap | S_parent | Sequence | Y51F10 | |
| Flanking_sequences | atttccgccgaaaaatttttttttt | aatttaaattttaattactgtggtt | |||
| Mapping_target | Y51F10 | ||||
| Type_of_mutation | Substitution | A | T | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004600 | From_analysis | Million_mutation_project_reanalysis | ||
| WBStrain00004602 | From_analysis | WGS_De_Bono | |||
| WGS_Hawaiian_Waterston | |||||
| Million_mutation_project_reanalysis | |||||
| WBStrain00006642 | From_analysis | WGS_De_Bono | |||
| WBStrain00006643 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00006645 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023138 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027647 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | |||
| Laboratory | RW | ||||
| AX | |||||
| Person | WBPerson1562 | ||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| WGS_De_Bono | |||||
| Million_mutation_project_reanalysis | |||||
| History | Acquires_merge | WBVar01418939 | |||
| WBVar01322373 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00021765 | |||
| Transcript | Y51F10.4c.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y51F10.4c.1:c.408+56A>T | ||||
| Intron_number | 1/3 | ||||
| Y51F10.4b.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y51F10.4b.1:c.520-2158A>T | ||||
| Intron_number | 3/6 | ||||
| Y51F10.4a.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y51F10.4a.1:c.1038+56A>T | ||||
| Intron_number | 4/7 | ||||
| Reference | WBPaper00037807 | ||||
| Remark | [20081124 db] this Variation was previously named hw2991 | ||||
| Method | WGS_Hawaiian_Waterston |
