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WormBase Tree Display for Variation: WBVar00149706

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Name Class

WBVar00149706EvidencePaper_evidenceWBPaper00037807
NamePublic_nameWBVar00149706
Other_namehaw2956
cewivar00162353
Y71G12A.2b.1:c.3061+88G>T
Y71G12A.2c.4:c.562+88G>T
Y71G12A.2c.2:c.562+88G>T
Y71G12A.2c.1:c.562+88G>T
Y71G12A.2c.3:c.562+88G>T
HGVSgCHROMOSOME_I:g.1918319G>T
Sequence_detailsSMapS_parentSequenceY51F10
Flanking_sequencesaattaaaaaaaaaactttttaaggtgagcagcagcgccagtgggggattt
Mapping_targetY51F10
Type_of_mutationSubstitutionGT
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisWGS_De_Bono
WGS_Hawaiian_Waterston
Million_mutation_project_reanalysis
WBStrain00006637From_analysisMillion_mutation_project_reanalysis
WBStrain00022852From_analysisMillion_mutation_project_reanalysis
WBStrain00022856From_analysisMillion_mutation_project_reanalysis
WBStrain00023665From_analysisMillion_mutation_project_reanalysis
LaboratoryRW
AX
PersonWBPerson1562
AnalysisWGS_Hawaiian_Waterston
WGS_De_Bono
Million_mutation_project_reanalysis
HistoryAcquires_mergeWBVar01321617
StatusLive
AffectsGeneWBGene00022138
TranscriptY71G12A.2c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY71G12A.2c.1:c.562+88G>T
Intron_number12/14
Y71G12A.2c.4VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY71G12A.2c.4:c.562+88G>T
Intron_number3/5
Y71G12A.2b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY71G12A.2b.1:c.3061+88G>T
Intron_number13/15
Y71G12A.2c.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY71G12A.2c.2:c.562+88G>T
Intron_number9/11
Y71G12A.2c.3VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY71G12A.2c.3:c.562+88G>T
Intron_number7/9
ReferenceWBPaper00037807
Remark[20081124 db] this Variation was previously named hw2956
MethodWGS_Hawaiian_Waterston