WormBase Tree Display for Variation: WBVar00149691

WBVar00149691 Evidence: Paper_evidence: WBPaper00037807
  Name: Public_name: WBVar00149691
    Other_name: haw2941
      cewivar00070143
      Y71G12A.2c.1:c.-269-107C>T
      Y71G12A.2c.2:c.-269-107C>T
      Y71G12A.2c.3:c.-269-107C>T
      Y71G12A.2b.1:c.2231-107C>T
    HGVSg: CHROMOSOME_I:g.1910108C>T
  Sequence_details: SMap: S_parent: Sequence: Y71G12A
    Flanking_sequences: cgtttttgaaaatctgaaaatttag cctgagttgtttaaaataacggttt
    Mapping_target: Y71G12A
    Type_of_mutation: Substitution: C T
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain (19)
    Laboratory: RW
      AX
    Person: WBPerson1562
    Analysis: WGS_Hawaiian_Waterston
      WGS_De_Bono
      Million_mutation_project_reanalysis
    History: Acquires_merge: WBVar01321461
    Status: Live
  Affects: Gene: WBGene00022138
    Transcript: Y71G12A.2c.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y71G12A.2c.1:c.-269-107C>T
        Intron_number: 8/14
      Y71G12A.2b.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y71G12A.2b.1:c.2231-107C>T
        Intron_number: 10/15
      Y71G12A.2c.2 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y71G12A.2c.2:c.-269-107C>T
        Intron_number: 5/11
      Y71G12A.2c.3 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y71G12A.2c.3:c.-269-107C>T
        Intron_number: 3/9
  Reference: WBPaper00037807
  Remark: [20081124 db] this Variation was previously named hw2941
  Method: WGS_Hawaiian_Waterston