WormBase Tree Display for Variation: WBVar00149172

WBVar00149172 Evidence: Paper_evidence: WBPaper00037807
  Name: Public_name: WBVar00149172
    Other_name: haw2422
      cewivar00161960
      Y73E7A.9c.1:c.448-476A>T
      Y73E7A.9b.1:c.601-476A>T
      Y73E7A.9a.1:c.1225-476A>T
      Y73E7A.9d.1:c.100-476A>T
    HGVSg: CHROMOSOME_I:g.1617357A>T
  Sequence_details: SMap: S_parent: Sequence: Y73E7A
    Flanking_sequences: gaatttttttgtgaagtttcattatgaaattcggtgttttcagacaattttaagtctaataaagcaattt aaaaaattcgacttcaccaccttta
    Mapping_target: Y73E7A
    Type_of_mutation: Substitution: A T
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00004602 From_analysis: WGS_De_Bono
          WGS_Hawaiian_Waterston
          Million_mutation_project_reanalysis
    Laboratory: RW
      AX
    Person: WBPerson1562
    Analysis: WGS_Hawaiian_Waterston
      WGS_De_Bono
      Million_mutation_project_reanalysis
    History: Acquires_merge: WBVar01313195
    Status: Live
  Affects: Gene: WBGene00044440
    Transcript: Y73E7A.9a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y73E7A.9a.1:c.1225-476A>T
        Intron_number: 6/8
      Y73E7A.9c.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y73E7A.9c.1:c.448-476A>T
        Intron_number: 2/3
      Y73E7A.9d.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y73E7A.9d.1:c.100-476A>T
        Intron_number: 1/2
      Y73E7A.9b.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y73E7A.9b.1:c.601-476A>T
        Intron_number: 3/4
  Reference: WBPaper00037807
  Remark: [20081124 db] this Variation was previously named hw2422
  Method: WGS_Hawaiian_Waterston