WormBase Tree Display for Variation: WBVar00149092
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| WBVar00149092 | Name | Public_name | WBVar00149092 | ||
|---|---|---|---|---|---|
| Other_name | haw2342 | ||||
| haw113870 | |||||
| cewivar00161895 | |||||
| Y73E7A.3a.1:c.1047C>T | |||||
| Y73E7A.3c.1:c.744C>T | |||||
| CE49591:p.Phe248= | |||||
| CE49551:p.Phe349= | |||||
| Y73E7A.3a.2:c.1047C>T | |||||
| HGVSg | CHROMOSOME_I:g.1592181C>T | ||||
| Sequence_details | SMap | S_parent | Sequence | Y73E7A | |
| Flanking_sequences | tgttcgccttttcaatgttcatatt | tactcattggttactgtagttctgc | |||
| Mapping_target | Y73E7A | ||||
| Type_of_mutation | Substitution | C | T | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004602 | From_analysis | WGS_De_Bono | ||
| WGS_Hawaiian_Waterston | |||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| WBStrain00006637 | From_analysis | Million_mutation_project_reanalysis | |||
| Laboratory | RW | ||||
| AX | |||||
| Person | WBPerson1562 | ||||
| WBPerson4037 | |||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| WGS_De_Bono | |||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| History | Acquires_merge | WBVar00533735 | |||
| WBVar01311973 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00022270 | |||
| Transcript | Y73E7A.3a.2 | VEP_consequence | synonymous_variant | ||
| VEP_impact | LOW | ||||
| HGVSc | Y73E7A.3a.2:c.1047C>T | ||||
| HGVSp | CE49551:p.Phe349= | ||||
| cDNA_position | 1094 | ||||
| CDS_position | 1047 | ||||
| Protein_position | 349 | ||||
| Exon_number | 9/13 | ||||
| Codon_change | ttC/ttT | ||||
| Amino_acid_change | F | ||||
| Y73E7A.3a.1 | VEP_consequence | synonymous_variant | |||
| VEP_impact | LOW | ||||
| HGVSc | Y73E7A.3a.1:c.1047C>T | ||||
| HGVSp | CE49551:p.Phe349= | ||||
| cDNA_position | 1143 | ||||
| CDS_position | 1047 | ||||
| Protein_position | 349 | ||||
| Exon_number | 10/14 | ||||
| Codon_change | ttC/ttT | ||||
| Amino_acid_change | F | ||||
| Y73E7A.3c.1 | VEP_consequence | synonymous_variant | |||
| VEP_impact | LOW | ||||
| HGVSc | Y73E7A.3c.1:c.744C>T | ||||
| HGVSp | CE49591:p.Phe248= | ||||
| cDNA_position | 810 | ||||
| CDS_position | 744 | ||||
| Protein_position | 248 | ||||
| Exon_number | 7/11 | ||||
| Codon_change | ttC/ttT | ||||
| Amino_acid_change | F | ||||
| Reference | WBPaper00038208 | ||||
| WBPaper00037807 | |||||
| Remark | [20081124 db] this Variation was previously named hw2342 | ||||
| Method | WGS_Hawaiian_Waterston |
