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WormBase Tree Display for Variation: WBVar00148550

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Name Class

WBVar00148550NamePublic_nameWBVar00148550
Other_namehaw1800
haw113491
cewivar00161606
Y48G8AL.1c.1:c.1626+293A>G
Y48G8AL.1a.2:c.2754+293A>G
Y48G8AL.1d.1:c.1209+293A>G
Y48G8AL.1a.1:c.2754+293A>G
Y48G8AL.1b.1:c.1761+293A>G
Y48G8AL.1e.1:c.336+293A>G
HGVSgCHROMOSOME_I:g.1248251A>G
Sequence_detailsSMapS_parentSequenceY48G8AL
Flanking_sequencestgcccaaaaaatgacaaaaaaacaattgggcaaaaataaaaaattgttta
Mapping_targetY48G8AL
Type_of_mutationSubstitutionAG
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisWGS_De_Bono
WGS_Hawaiian_Waterston
WGS_Yanai
Million_mutation_project_reanalysis
LaboratoryRW
AX
PersonWBPerson1562
WBPerson4037
AnalysisWGS_Hawaiian_Waterston
WGS_De_Bono
WGS_Yanai
Million_mutation_project_reanalysis
HistoryAcquires_mergeWBVar00533356
WBVar01303128
StatusLive
AffectsGeneWBGene00021685
TranscriptY48G8AL.1b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY48G8AL.1b.1:c.1761+293A>G
Intron_number11/12
Y48G8AL.1c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY48G8AL.1c.1:c.1626+293A>G
Intron_number10/11
Y48G8AL.1e.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY48G8AL.1e.1:c.336+293A>G
Intron_number2/3
Y48G8AL.1a.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY48G8AL.1a.2:c.2754+293A>G
Intron_number17/19
Y48G8AL.1a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY48G8AL.1a.1:c.2754+293A>G
Intron_number17/19
Y48G8AL.1d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY48G8AL.1d.1:c.1209+293A>G
Intron_number8/9
ReferenceWBPaper00038208
WBPaper00037807
Remark[20081124 db] this Variation was previously named hw1800
MethodWGS_Hawaiian_Waterston