WormBase Tree Display for Variation: WBVar00148539
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WBVar00148539 | Name | Public_name | WBVar00148539 | ||
---|---|---|---|---|---|
Other_name | haw1789 | ||||
haw113481 | |||||
cewivar00068119 | |||||
Y48G8AL.1a.1:c.2180+1011C>A | |||||
Y48G8AL.1d.1:c.635+1011C>A | |||||
Y48G8AL.1a.2:c.2180+1011C>A | |||||
Y48G8AL.1c.1:c.1052+1011C>A | |||||
Y48G8AL.1b.1:c.1187+1011C>A | |||||
HGVSg | CHROMOSOME_I:g.1243868C>A | ||||
Sequence_details | SMap | S_parent | Sequence | Y48G8AL | |
Flanking_sequences | aaacactattttttaatttaaaaaa | ttttgaaaaaaattgaactccttat | |||
Mapping_target | Y48G8AL | ||||
Type_of_mutation | Substitution | C | A | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (31) | |||||
Laboratory | RW | ||||
AX | |||||
Person | WBPerson1562 | ||||
WBPerson4037 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_De_Bono | |||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar01302951 | |||
WBVar00533346 | |||||
Status | Live | ||||
Affects | Gene | WBGene00021685 | |||
Transcript | Y48G8AL.1b.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | Y48G8AL.1b.1:c.1187+1011C>A | ||||
Intron_number | 8/12 | ||||
Y48G8AL.1c.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y48G8AL.1c.1:c.1052+1011C>A | ||||
Intron_number | 7/11 | ||||
Y48G8AL.1a.2 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y48G8AL.1a.2:c.2180+1011C>A | ||||
Intron_number | 14/19 | ||||
Y48G8AL.1a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y48G8AL.1a.1:c.2180+1011C>A | ||||
Intron_number | 14/19 | ||||
Y48G8AL.1d.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y48G8AL.1d.1:c.635+1011C>A | ||||
Intron_number | 5/9 | ||||
Reference | WBPaper00038208 | ||||
WBPaper00037807 | |||||
Remark | [20081124 db] this Variation was previously named hw1789 | ||||
Method | WGS_Hawaiian_Waterston |