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WormBase Tree Display for Variation: WBVar00148511

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Name Class

WBVar00148511NamePublic_nameWBVar00148511
Other_namehaw1761
haw113472
cewivar00119556
Y48G8AL.1b.1:c.589+240G>A
Y48G8AL.1a.1:c.1582+240G>A
Y48G8AL.1c.1:c.454+240G>A
Y48G8AL.1a.2:c.1582+240G>A
Y48G8AL.1d.1:c.37+240G>A
HGVSgCHROMOSOME_I:g.1236598G>A
Sequence_detailsSMapS_parentSequenceY48G8AL
Flanking_sequencesttttatcgaaaaagcaaataaaatcgcccgataaaacgattaatttcgag
Mapping_targetY48G8AL
Type_of_mutationSubstitutionGA
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004599From_analysisMillion_mutation_project_reanalysis
WBStrain00004602From_analysisWGS_De_Bono
WGS_Hawaiian_Waterston
WGS_Yanai
Million_mutation_project_reanalysis
LaboratoryRW
AX
PersonWBPerson1562
WBPerson4037
AnalysisWGS_Hawaiian_Waterston
WGS_De_Bono
WGS_Yanai
Million_mutation_project_reanalysis
HistoryAcquires_mergeWBVar01302628
WBVar00533337
StatusLive
AffectsGeneWBGene00021685
TranscriptY48G8AL.1b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY48G8AL.1b.1:c.589+240G>A
Intron_number4/12
Y48G8AL.1c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY48G8AL.1c.1:c.454+240G>A
Intron_number3/11
Y48G8AL.1a.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY48G8AL.1a.2:c.1582+240G>A
Intron_number10/19
Y48G8AL.1a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY48G8AL.1a.1:c.1582+240G>A
Intron_number10/19
Y48G8AL.1d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY48G8AL.1d.1:c.37+240G>A
Intron_number1/9
ReferenceWBPaper00038208
WBPaper00037807
Remark[20081124 db] this Variation was previously named hw1761
MethodWGS_Hawaiian_Waterston