WormBase Tree Display for Variation: WBVar00148511
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WBVar00148511 | Name | Public_name | WBVar00148511 | ||
---|---|---|---|---|---|
Other_name | haw1761 | ||||
haw113472 | |||||
cewivar00119556 | |||||
Y48G8AL.1b.1:c.589+240G>A | |||||
Y48G8AL.1a.1:c.1582+240G>A | |||||
Y48G8AL.1c.1:c.454+240G>A | |||||
Y48G8AL.1a.2:c.1582+240G>A | |||||
Y48G8AL.1d.1:c.37+240G>A | |||||
HGVSg | CHROMOSOME_I:g.1236598G>A | ||||
Sequence_details | SMap | S_parent | Sequence | Y48G8AL | |
Flanking_sequences | ttttatcgaaaaagcaaataaaatc | gcccgataaaacgattaatttcgag | |||
Mapping_target | Y48G8AL | ||||
Type_of_mutation | Substitution | G | A | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004599 | From_analysis | Million_mutation_project_reanalysis | ||
WBStrain00004602 | From_analysis | WGS_De_Bono | |||
WGS_Hawaiian_Waterston | |||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
Laboratory | RW | ||||
AX | |||||
Person | WBPerson1562 | ||||
WBPerson4037 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_De_Bono | |||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar01302628 | |||
WBVar00533337 | |||||
Status | Live | ||||
Affects | Gene | WBGene00021685 | |||
Transcript | Y48G8AL.1b.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | Y48G8AL.1b.1:c.589+240G>A | ||||
Intron_number | 4/12 | ||||
Y48G8AL.1c.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y48G8AL.1c.1:c.454+240G>A | ||||
Intron_number | 3/11 | ||||
Y48G8AL.1a.2 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y48G8AL.1a.2:c.1582+240G>A | ||||
Intron_number | 10/19 | ||||
Y48G8AL.1a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y48G8AL.1a.1:c.1582+240G>A | ||||
Intron_number | 10/19 | ||||
Y48G8AL.1d.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y48G8AL.1d.1:c.37+240G>A | ||||
Intron_number | 1/9 | ||||
Reference | WBPaper00038208 | ||||
WBPaper00037807 | |||||
Remark | [20081124 db] this Variation was previously named hw1761 | ||||
Method | WGS_Hawaiian_Waterston |