WormBase Tree Display for Variation: WBVar00148305
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| WBVar00148305 | Name | Public_name | WBVar00148305 | ||
|---|---|---|---|---|---|
| Other_name | haw1555 | ||||
| haw113324 | |||||
| cewivar00161505 | |||||
| Y48G8AL.10c.1:c.2386-310T>C | |||||
| Y48G8AL.10b.1:c.2422-310T>C | |||||
| Y48G8AL.10d.1:c.1486-310T>C | |||||
| Y48G8AL.10e.1:c.256-310T>C | |||||
| Y48G8AL.10a.1:c.3511-310T>C | |||||
| HGVSg | CHROMOSOME_I:g.1137052A>G | ||||
| Sequence_details | SMap | S_parent | Sequence | Y48G8AL | |
| Flanking_sequences | atttctacattcaagttagtttttt | aaaattaaaaaaaaatatattttta | |||
| Mapping_target | Y48G8AL | ||||
| Type_of_mutation | Substitution | A | G | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004602 | From_analysis | WGS_Hawaiian_Waterston | ||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| WBStrain00006642 | From_analysis | WGS_De_Bono | |||
| WBStrain00006643 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00006645 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023191 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023665 | From_analysis | Million_mutation_project_reanalysis | |||
| Laboratory | RW | ||||
| AX | |||||
| Person | WBPerson1562 | ||||
| WBPerson4037 | |||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| WGS_De_Bono | |||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| History | Acquires_merge | WBVar01417586 | |||
| WBVar00533189 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00021689 | |||
| Transcript | Y48G8AL.10e.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y48G8AL.10e.1:c.256-310T>C | ||||
| Intron_number | 1/1 | ||||
| Y48G8AL.10d.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y48G8AL.10d.1:c.1486-310T>C | ||||
| Intron_number | 7/7 | ||||
| Y48G8AL.10a.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y48G8AL.10a.1:c.3511-310T>C | ||||
| Intron_number | 13/14 | ||||
| Y48G8AL.10c.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y48G8AL.10c.1:c.2386-310T>C | ||||
| Intron_number | 8/8 | ||||
| Y48G8AL.10b.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y48G8AL.10b.1:c.2422-310T>C | ||||
| Intron_number | 9/9 | ||||
| Reference | WBPaper00038208 | ||||
| WBPaper00037807 | |||||
| Remark | [20081124 db] this Variation was previously named hw1555 | ||||
| Method | WGS_Hawaiian_Waterston |
