WormBase Tree Display for Variation: WBVar00147670
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WBVar00147670 | Evidence | Paper_evidence | WBPaper00037807 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00147670 | |||
Other_name | haw920 | ||||
cewivar00160986 | |||||
Y65B4A.2b.1:c.41-2454G>A | |||||
Y65B4A.2c.1:c.79+1G>A | |||||
HGVSg | CHROMOSOME_I:g.642997G>A | ||||
Sequence_details | SMap | S_parent | Sequence | Y65B4A | |
Flanking_sequences | ataaattcaaatgagatgccaaaaa | tgagttcgaacttgtggaaaatgtg | |||
Mapping_target | Y65B4A | ||||
Type_of_mutation | Substitution | G | A | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | WGS_De_Bono | ||
WGS_Hawaiian_Waterston | |||||
Million_mutation_project_reanalysis | |||||
WBStrain00006640 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027647 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | |||
Laboratory | RW | ||||
AX | |||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_De_Bono | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar01287596 | |||
Status | Live | ||||
Affects | Gene | WBGene00022026 | |||
Transcript | Y65B4A.2b.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | Y65B4A.2b.1:c.41-2454G>A | ||||
Intron_number | 2/8 | ||||
Y65B4A.2c.1 | VEP_consequence | splice_donor_variant | |||
VEP_impact | HIGH | ||||
HGVSc | Y65B4A.2c.1:c.79+1G>A | ||||
Intron_number | 2/8 | ||||
Reference | WBPaper00037807 | ||||
Remark | [20081124 db] this Variation was previously named hw920 | ||||
Method | WGS_Hawaiian_Waterston |