WormBase Tree Display for Variation: WBVar00147173

WBVar00147173 Evidence: Paper_evidence: WBPaper00037807
  Name: Public_name: WBVar00147173
    Other_name: haw423
      cewivar00160500
      C53D5.1d.1:c.854+90A>T
      C53D5.1c.2:c.752+90A>T
      C53D5.1b.1:c.941+90A>T
      C53D5.1a.1:c.947+90A>T
      C53D5.1c.1:c.752+90A>T
    HGVSg: CHROMOSOME_I:g.303999A>T
  Sequence_details: SMap: S_parent: Sequence: C53D5
    Flanking_sequences: aaacgtaattcgaataaaagttatt atgattttttaaacaaaaaaattga
    Mapping_target: C53D5
    Type_of_mutation: Substitution: A T
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00004602 From_analysis: WGS_De_Bono
          WGS_Hawaiian_Waterston
          Million_mutation_project_reanalysis
    Laboratory: RW
      AX
    Person: WBPerson1562
    Analysis: WGS_Hawaiian_Waterston
      WGS_De_Bono
      Million_mutation_project_reanalysis
    History: Acquires_merge: WBVar01279840
    Status: Live
  Affects: Gene: WBGene00016902
    Transcript: C53D5.1a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: C53D5.1a.1:c.947+90A>T
        Intron_number: 7/9
      C53D5.1c.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: C53D5.1c.1:c.752+90A>T
        Intron_number: 5/7
      C53D5.1d.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: C53D5.1d.1:c.854+90A>T
        Intron_number: 5/6
      C53D5.1c.2 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: C53D5.1c.2:c.752+90A>T
        Intron_number: 6/8
      C53D5.1b.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: C53D5.1b.1:c.941+90A>T
        Intron_number: 7/9
  Reference: WBPaper00037807
  Remark: [20081124 db] this Variation was previously named hw423
  Method: WGS_Hawaiian_Waterston