WormBase Tree Display for Variation: WBVar00147048
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WBVar00147048 | Evidence | Paper_evidence | WBPaper00037807 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00147048 | |||
Other_name | haw298 | ||||
cewivar00160368 | |||||
Y48G1BL.2b.1:c.3902+36A>C | |||||
Y48G1BL.2a.1:c.5933+36A>C | |||||
HGVSg | CHROMOSOME_I:g.204721A>C | ||||
Sequence_details | SMap | S_parent | Sequence | Y48G1BL | |
Flanking_sequences | cggctaaattttttttgaaatttcg | aaaagacgagaaattcgatttctta | |||
Mapping_target | Y48G1BL | ||||
Type_of_mutation | Substitution | A | C | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | WGS_De_Bono | ||
WGS_Hawaiian_Waterston | |||||
Million_mutation_project_reanalysis | |||||
Laboratory | RW | ||||
AX | |||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_De_Bono | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar01277807 | |||
Status | Live | ||||
Affects | Gene | WBGene00000227 | |||
Transcript | Y48G1BL.2b.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | Y48G1BL.2b.1:c.3902+36A>C | ||||
Intron_number | 13/18 | ||||
Y48G1BL.2a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y48G1BL.2a.1:c.5933+36A>C | ||||
Intron_number | 23/29 | ||||
Reference | WBPaper00037807 | ||||
Remark | [20081124 db] this Variation was previously named hw298 | ||||
Method | WGS_Hawaiian_Waterston |