WormBase Tree Display for Variation: WBVar00146882
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WBVar00146882 | Name | Public_name | WBVar00146882 | ||
---|---|---|---|---|---|
Other_name | haw132 | ||||
haw112196 | |||||
cewivar00160221 | |||||
Y48G1C.2b.1:c.1702-34A>T | |||||
Y48G1C.2a.2:c.1447-34A>T | |||||
Y48G1C.2a.3:c.1447-34A>T | |||||
Y48G1C.2a.1:c.1447-34A>T | |||||
HGVSg | CHROMOSOME_I:g.79279A>T | ||||
Sequence_details | SMap | S_parent | Sequence | Y48G1C | |
Flanking_sequences | taaccatcagaaacacaaaaaaaac | actttttttttctttttgaattaat | |||
Mapping_target | Y48G1C | ||||
Type_of_mutation | Substitution | A | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | WGS_De_Bono | ||
WGS_Hawaiian_Waterston | |||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
Laboratory | RW | ||||
AX | |||||
Person | WBPerson1562 | ||||
WBPerson4037 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_De_Bono | |||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar00532061 | |||
WBVar01275450 | |||||
Status | Live | ||||
Affects | Gene | WBGene00000812 | |||
Transcript | Y48G1C.2a.3 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | Y48G1C.2a.3:c.1447-34A>T | ||||
Intron_number | 11/14 | ||||
Y48G1C.2a.2 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y48G1C.2a.2:c.1447-34A>T | ||||
Intron_number | 11/13 | ||||
Y48G1C.2a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y48G1C.2a.1:c.1447-34A>T | ||||
Intron_number | 10/12 | ||||
Y48G1C.2b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y48G1C.2b.1:c.1702-34A>T | ||||
Intron_number | 11/12 | ||||
Reference | WBPaper00038208 | ||||
WBPaper00037807 | |||||
Remark | [20081124 db] this Variation was previously named hw132 | ||||
Method | WGS_Hawaiian_Waterston |