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WormBase Tree Display for Variation: WBVar00146882

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Name Class

WBVar00146882NamePublic_nameWBVar00146882
Other_namehaw132
haw112196
cewivar00160221
Y48G1C.2b.1:c.1702-34A>T
Y48G1C.2a.2:c.1447-34A>T
Y48G1C.2a.3:c.1447-34A>T
Y48G1C.2a.1:c.1447-34A>T
HGVSgCHROMOSOME_I:g.79279A>T
Sequence_detailsSMapS_parentSequenceY48G1C
Flanking_sequencestaaccatcagaaacacaaaaaaaacactttttttttctttttgaattaat
Mapping_targetY48G1C
Type_of_mutationSubstitutionAT
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisWGS_De_Bono
WGS_Hawaiian_Waterston
WGS_Yanai
Million_mutation_project_reanalysis
LaboratoryRW
AX
PersonWBPerson1562
WBPerson4037
AnalysisWGS_Hawaiian_Waterston
WGS_De_Bono
WGS_Yanai
Million_mutation_project_reanalysis
HistoryAcquires_mergeWBVar00532061
WBVar01275450
StatusLive
AffectsGeneWBGene00000812
TranscriptY48G1C.2a.3VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY48G1C.2a.3:c.1447-34A>T
Intron_number11/14
Y48G1C.2a.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY48G1C.2a.2:c.1447-34A>T
Intron_number11/13
Y48G1C.2a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY48G1C.2a.1:c.1447-34A>T
Intron_number10/12
Y48G1C.2b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY48G1C.2b.1:c.1702-34A>T
Intron_number11/12
ReferenceWBPaper00038208
WBPaper00037807
Remark[20081124 db] this Variation was previously named hw132
MethodWGS_Hawaiian_Waterston