WormBase Tree Display for Variation: WBVar00146132
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WBVar00146132 | Name | Public_name | gk829 | ||
---|---|---|---|---|---|
HGVSg | CHROMOSOME_X:g.10204949_10205673del | ||||
Sequence_details | SMap | S_parent | Sequence | F44A6 | |
Flanking_sequences | agaaatagactccctaacttaccacttgtt | cgtgtattaatctgcgctgaatgcctgcct | |||
Mapping_target | F44A6 | ||||
Type_of_mutation | Deletion | ||||
PCR_product | gk829_external | ||||
gk829_internal | |||||
SeqStatus | Sequenced | ||||
Variation_type | Allele | ||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00036806 | ||||
Laboratory | VC | ||||
Person | WBPerson427 | ||||
KO_consortium_allele | |||||
Status | Live | ||||
Affects | Gene | WBGene00004786 | |||
Transcript | F44A6.2.1 | VEP_consequence | splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,5_prime_UTR_variant,intron_variant | ||
VEP_impact | HIGH | ||||
cDNA_position | ?-359 | ||||
CDS_position | ?-359 | ||||
Protein_position | ?-120 | ||||
Intron_number | 1/8 | ||||
Exon_number | 1-2/9 | ||||
Isolation | Mutagen | UV/TMP | |||
Remark | Sequenced by the C. elegans Gene Knockout Consortium | Paper_evidence | WBPaper00041807 | ||
Method | KO_consortium_allele |