WormBase Tree Display for Variation: WBVar00145900

WBVar00145900 Evidence: Paper_evidence: WBPaper00032399
  Name: Public_name: gk529
    Other_name: R07E5.2.1:c.81_159+22del
    HGVSg: CHROMOSOME_III:g.4407524_4407624del
  Sequence_details: SMap: S_parent: Sequence: R07E5
    Flanking_sequences: cacccgccagttgagcacatctcgtgctct atttttttcaaaaattaattccaggtgatt
    Mapping_target: R07E5
    Type_of_mutation: Deletion
    PCR_product: gk529_external
      gk529_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00036368
    Laboratory: VC
    Person: WBPerson427
    KO_consortium_allele
    Status: Live
  Affects: Gene: WBGene00011110
    Transcript: R07E5.2.1 VEP_consequence: splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: R07E5.2.1:c.81_159+22del
        cDNA_position: 81-?
        CDS_position: 81-?
        Protein_position: 27-?
        Intron_number: 1/3
        Exon_number: 1/4
  Isolation: Mutagen: UV/TMP
  Description: Phenotype: WBPhenotype:0002382 Paper_evidence: WBPaper00048427
        Curator_confirmed: WBPerson11689
        Phenotype_assay: Genotype: dvIs19 [Pgst-4::GFP::NLS] Paper_evidence: WBPaper00048427
              Curator_confirmed: WBPerson11689
    Phenotype_not_observed: WBPhenotype:0001621 Paper_evidence: WBPaper00032399
        Curator_confirmed: WBPerson712
        Remark: Animals were as sensitive to exposure to 1.0mM and 10mM hydrogen peroxide as wild-type animals. Paper_evidence: WBPaper00032399
            Curator_confirmed: WBPerson712
  Reference: WBPaper00032399
    WBPaper00048427
  Remark: Sequenced by the C. elegans Gene Knockout Consortium Paper_evidence: WBPaper00041807
  Method: KO_consortium_allele