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WormBase Tree Display for Variation: WBVar00145856

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Name Class

WBVar00145856NamePublic_namegk451
HGVSgCHROMOSOME_I:g.9392866_9393235del
Sequence_detailsSMapS_parentSequenceF16A11
Flanking_sequencesatgattcactaaccgaatgtccaacaattcatctcaaaatctttagtcaagaaaacattc
Mapping_targetF16A11
Type_of_mutationDeletion
PCR_productGK451_external
GK451_internal
SeqStatusSequenced
Variation_typeAllele
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00036319
LaboratoryVC
PersonWBPerson427
KO_consortium_allele
StatusLive
AffectsGeneWBGene00008877
TranscriptF16A11.2a.1VEP_consequencecoding_sequence_variant,5_prime_UTR_variant
VEP_impactMODIFIER
cDNA_position?-230
CDS_position?-229
Protein_position?-77
Exon_number1-2/6
IsolationMutagenTMP/UV
DescriptionPhenotypeWBPhenotype:0000688Paper_evidenceWBPaper00045971
Curator_confirmedWBPerson236
WBPhenotype:0001037Paper_evidenceWBPaper00046051
Curator_confirmedWBPerson13472
WBPhenotype:0001504Paper_evidenceWBPaper00046051
Curator_confirmedWBPerson13472
WBPhenotype:0001719Paper_evidenceWBPaper00045971
Curator_confirmedWBPerson236
EQ_annotationsGO_termGO:0030968PATO:0000460Paper_evidenceWBPaper00045971
Curator_confirmedWBPerson236
Phenotype_not_observedWBPhenotype:0000054Paper_evidenceWBPaper00046051
Curator_confirmedWBPerson13472
ReferenceWBPaper00046051
WBPaper00045971
WBPaper00049237
RemarkSequenced by the C. elegans Gene Knockout ConsortiumPaper_evidenceWBPaper00041807
MethodKO_consortium_allele