Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for Variation: WBVar00145412

expand all nodes | collapse all nodes | view schema

Name Class

WBVar00145412EvidencePaper_evidenceWBPaper00024331
NamePublic_namega80
Other_nameCE08973:p.Gln97Ter
C54D1.6.1:c.289C>T
HGVSgCHROMOSOME_X:g.7170149G>A
Sequence_detailsSMapS_parentSequenceC54D1
Flanking_sequencesgactatgagccgatccccactctttcagataagtaagaccatttcatatcaaaatgcgct
Mapping_targetC54D1
Type_of_mutationSubstitutionctPaper_evidenceWBPaper00024331
SeqStatusSequenced
Variation_typeAllele
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00007434
WBStrain00023612
WBStrain00034113
WBStrain00034115
WBStrain00034116
LaboratorySD
StatusLive
AffectsGeneWBGene00000238
TranscriptC54D1.6.1VEP_consequencestop_gained,splice_region_variant
VEP_impactHIGH
HGVScC54D1.6.1:c.289C>T
HGVSpCE08973:p.Gln97Ter
cDNA_position298
CDS_position289
Protein_position97
Exon_number4/19
Codon_changeCaa/Taa
Amino_acid_changeQ/*
InteractorWBInteraction000000712
WBInteraction000000713
WBInteraction000000714
WBInteraction000001241
WBInteraction000001244
WBInteraction000002712
WBInteraction000002750
WBInteraction000002759
WBInteraction000006019
WBInteraction000006020
WBInteraction000006021
WBInteraction000006022
WBInteraction000006023
WBInteraction000006024
WBInteraction000006025
WBInteraction000006026
WBInteraction000006027
WBInteraction000006028
WBInteraction000006029
WBInteraction000006030
WBInteraction000006031
WBInteraction000006032
WBInteraction000006033
WBInteraction000006034
WBInteraction000006035
WBInteraction000006036
WBInteraction000006378
WBInteraction000006379
WBInteraction000006384
WBInteraction000006385
WBInteraction000006388
WBInteraction000006403
WBInteraction000006404
WBInteraction000006412
WBInteraction000006424
WBInteraction000006428
WBInteraction000006438
WBInteraction000006445
WBInteraction000006449
WBInteraction000006456
WBInteraction000006457
WBInteraction000006460
WBInteraction000006461
WBInteraction000006462
WBInteraction000006463
WBInteraction000006464
WBInteraction000006465
WBInteraction000006466
WBInteraction000006493
WBInteraction000006494
WBInteraction000006495
WBInteraction000006496
WBInteraction000006500
WBInteraction000006504
WBInteraction000006513
WBInteraction000006518
WBInteraction000006534
WBInteraction000006543
WBInteraction000006551
WBInteraction000006557
WBInteraction000006558
WBInteraction000006559
WBInteraction000006560
WBInteraction000006561
WBInteraction000006568
WBInteraction000006572
WBInteraction000006580
WBInteraction000006601
WBInteraction000006606
WBInteraction000006613
WBInteraction000006630
WBInteraction000006631
WBInteraction000006632
WBInteraction000006633
WBInteraction000006634
WBInteraction000006635
WBInteraction000006643
WBInteraction000006644
WBInteraction000006645
WBInteraction000006649
WBInteraction000006651
WBInteraction000006652
WBInteraction000006653
WBInteraction000006654
WBInteraction000006655
WBInteraction000006656
WBInteraction000006657
WBInteraction000006675
WBInteraction000006679
WBInteraction000006687
WBInteraction000006688
WBInteraction000006689
WBInteraction000006702
WBInteraction000006703
WBInteraction000006704
WBInteraction000006705
WBInteraction000006710
WBInteraction000006717
WBInteraction000006725
WBInteraction000006726
WBInteraction000006727
WBInteraction000006728
WBInteraction000006729
WBInteraction000006773
WBInteraction000006774
WBInteraction000006797
WBInteraction000006798
WBInteraction000006799
WBInteraction000006814
WBInteraction000006830
WBInteraction000006831
WBInteraction000006832
WBInteraction000006833
WBInteraction000006834
WBInteraction000006861
WBInteraction000006865
WBInteraction000006866
WBInteraction000006882
WBInteraction000006883
WBInteraction000006898
WBInteraction000006899
WBInteraction000006908
WBInteraction000006909
WBInteraction000006910
WBInteraction000006911
WBInteraction000006912
WBInteraction000006913
WBInteraction000006914
WBInteraction000006915
WBInteraction000006967
WBInteraction000006971
WBInteraction000006989
WBInteraction000006992
WBInteraction000007011
WBInteraction000007015
WBInteraction000007016
WBInteraction000007019
WBInteraction000007057
WBInteraction000007069
WBInteraction000007084
WBInteraction000007085
WBInteraction000007086
WBInteraction000007087
WBInteraction000007137
WBInteraction000007145
WBInteraction000007154
WBInteraction000007175
WBInteraction000007188
WBInteraction000007189
WBInteraction000007212
WBInteraction000007213
WBInteraction000007231
WBInteraction000007252
WBInteraction000007253
WBInteraction000007259
WBInteraction000007260
WBInteraction000007261
WBInteraction000007262
WBInteraction000007294
WBInteraction000007297
WBInteraction000007344
WBInteraction000007345
WBInteraction000007346
WBInteraction000007347
WBInteraction000007348
WBInteraction000007390
WBInteraction000007391
WBInteraction000007403
WBInteraction000007408
WBInteraction000007409
WBInteraction000007410
WBInteraction000007411
WBInteraction000007412
WBInteraction000007413
WBInteraction000007453
WBInteraction000007477
WBInteraction000007478
WBInteraction000007479
WBInteraction000007480
WBInteraction000007481
WBInteraction000007501
WBInteraction000007505
WBInteraction000007506
WBInteraction000007519
WBInteraction000007529
WBInteraction000007530
WBInteraction000007555
WBInteraction000007579
WBInteraction000007580
WBInteraction000007592
WBInteraction000007640
WBInteraction000008561
WBInteraction000500224
WBInteraction000500500
WBInteraction000502068
WBInteraction000502112
WBInteraction000524145
WBInteraction000524146
WBInteraction000524369
WBInteraction000524373
WBInteraction000524374
WBInteraction000524375
WBInteraction000535393
WBInteraction000535542
WBInteraction000536173
WBInteraction000538640
WBInteraction000538648
WBInteraction000538654
WBInteraction000538658
WBInteraction000538692
WBInteraction000538752
IsolationMutagenEMS
GeneticsInterpolated_map_positionX-1.80941
DescriptionPhenotype (32)
Phenotype_not_observed (15)
Reference (30)
MethodSubstitution_allele