WormBase Tree Display for Variation: WBVar00145381

WBVar00145381 Evidence: Paper_evidence: WBPaper00004484
  Name: Public_name: g48
    Other_name: CE01548:p.His384Tyr
      F10B5.6.1:c.1150C>T
    HGVSg: CHROMOSOME_II:g.8160841G>A
  Sequence_details: SMap: S_parent: Sequence: F10B5
    Flanking_sequences: GTTCGTGTTCAACTTCATAGTGAAGAATAT ACCAAAAGCCACCCATCCTTCAGCAAACGT
    Mapping_target: F10B5
    Type_of_mutation: Substitution: G A
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00007841
      WBStrain00034900
      WBStrain00034901
      WBStrain00034904
    Laboratory: RC
      GG
    Status: Live
  Affects: Gene: WBGene00001281
    Transcript: F10B5.6.1 (12)
    Interactor: WBInteraction000500087
      WBInteraction000500090
      WBInteraction000500093
      WBInteraction000502681
  Genetics: Interpolated_map_position: II 0.732936
    Mapping_data: In_2_point: 582
        583
      In_multi_point: 485
      In_pos_neg_data (11)
  Description: Phenotype (14)
  Reference: WBPaper00031872
    WBPaper00033119
    WBPaper00004484
    WBPaper00022672
    WBPaper00037650
    WBPaper00011513
    WBPaper00044582
    WBPaper00065272
  Remark: [220503 skd] Corrected flanks and substitution details based on email received from Wendy Herbst: "As described in Golden et al. 2000, the mutation is c->t (ggcttttggtCatattcttc -> ggcttttggtTatattcttc), His -> Tyr (H384Y). I sequenced the g48 worms from CGC to confirm they have this mutation and NOT the mutation that is described on WormBase." Note that corrected information is referring to the positive strand sequence (skd). See GH ticket 8607. Curator_confirmed: WBPerson51134
  Method: Substitution_allele