WormBase Tree Display for Variation: WBVar00145341

WBVar00145341 Evidence: Person_evidence: WBPerson1503
  Name: Public_name: fj54
    Other_name: CE04431:p.Phe177GlyfsTer10
      F20D12.1a.1:c.529_968del
      F20D12.1b.1:c.40_479del
      F57H12.4.1:c.-608+598_-608+1121del
      CE39920:p.Phe14GlyfsTer10
      F20D12.1a.2:c.529_968del
    HGVSg: CHROMOSOME_IV:g.7958652_7959175del
  Sequence_details: SMap: S_parent: Sequence: F20D12
    Flanking_sequences: aagcaaaatccaagacttgccctgaacatc ggatattgtgacatcacagagtgccatta
    Mapping_target: F20D12
    Type_of_mutation: Deletion
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00040879
      WBStrain00054546
      WBStrain00054547
      WBStrain00055735
    Laboratory: ZT
    Status: Live
  Affects: Gene: WBGene00019019
      WBGene00017641
    Transcript: F57H12.4.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F57H12.4.1:c.-608+598_-608+1121del
        Intron_number: 1/8
      F20D12.1a.2 (11)
      F20D12.1a.1 (11)
      F20D12.1b.1 (11)
  Isolation: Mutagen: TMP/UV
  Genetics: Interpolated_map_position: IV 3.50893
  Description: Phenotype: WBPhenotype:0000679 Paper_evidence: WBPaper00035228
        Curator_confirmed: WBPerson712
        Remark: PGL-1 staining in the germline differs from wild type; PGL-1 accumulates in large granules and dissociated from nuclei periphery. Paper_evidence: WBPaper00035228
            Curator_confirmed: WBPerson712
  Reference: WBPaper00035228
    WBPaper00065293
  Method: Deletion_allele