WormBase Tree Display for Variation: WBVar00145025

WBVar00145025 Evidence: Paper_evidence: WBPaper00028462
  Name: Public_name: e2829
    Other_name: T06H11.1e.1:c.68-221_216+229del
      T06H11.1f.1:c.413-221_561+229del
      T06H11.1c.1:c.149-221_297+229del
      T06H11.1g.1:c.137-221_285+229del
      T06H11.1a.1:c.247_525+229del
      T06H11.1d.1:c.293-221_441+229del
      T06H11.1b.1:c.263-221_411+229del
    HGVSg: CHROMOSOME_X:g.10108954_10109552del
  Sequence_details: SMap: S_parent: Sequence: T06H11
    Flanking_sequences: ctatggaccggatcacaaccgcctaccggt gaataattcagaattttgaagactcttgtt
    Mapping_target: T06H11
    Type_of_mutation: Deletion
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Laboratory: CB
    Status: Live
  Affects: Gene: WBGene00006792
    Transcript: T06H11.1b.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: T06H11.1b.1:c.263-221_411+229del
        Intron_number: 3-4/12
        Exon_number: 4/13
      T06H11.1g.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: T06H11.1g.1:c.137-221_285+229del
        Intron_number: 2-3/12
        Exon_number: 3/13
      T06H11.1f.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: T06H11.1f.1:c.413-221_561+229del
        Intron_number: 4-5/14
        Exon_number: 5/15
      T06H11.1e.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: T06H11.1e.1:c.68-221_216+229del
        Intron_number: 2-3/13
        Exon_number: 3/14
      T06H11.1d.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: T06H11.1d.1:c.293-221_441+229del
        Intron_number: 1-2/11
        Exon_number: 2/12
      T06H11.1a.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: T06H11.1a.1:c.247_525+229del
        cDNA_position: 247-?
        CDS_position: 247-?
        Protein_position: 83-?
        Intron_number: 1-2/11
        Exon_number: 1-2/12
      T06H11.1c.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: T06H11.1c.1:c.149-221_297+229del
        Intron_number: 2-3/13
        Exon_number: 3/14
  Genetics: Interpolated_map_position: X 1.74798
  Reference: WBPaper00028462
  Method: Deletion_allele