WormBase Tree Display for Variation: WBVar00145019

WBVar00145019 Evidence: Paper_evidence: WBPaper00028462
  Name: Public_name: e2822
    Other_name: T06H11.1g.1:c.965-200_*187del
      T06H11.1e.1:c.934+185_*187del
      T06H11.1c.1:c.1015+185_*187del
      T06H11.1a.1:c.1205-200_*187del
    HGVSg: CHROMOSOME_X:g.10104912_10106498del
  Sequence_details: SMap: S_parent: Sequence: T06H11
    Flanking_sequences: tacaactcttgtctatcaatgtcatctatc acaacttgaaaacgggaacaacaaaaacct
    Mapping_target: T06H11
    Type_of_mutation: Deletion
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Laboratory: CB
    Status: Live
  Affects: Gene: WBGene00006792
    Transcript: T06H11.1b.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,3_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        Intron_number: 8-12/12
        Exon_number: 9-13/13
      T06H11.1g.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,3_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: T06H11.1g.1:c.965-200_*187del
        cDNA_position: ?-1865
        Intron_number: 7-11/12
        Exon_number: 8-13/13
      T06H11.1f.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,3_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        Intron_number: 10-14/14
        Exon_number: 11-15/15
      T06H11.1e.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,3_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: T06H11.1e.1:c.934+185_*187del
        cDNA_position: ?-1775
        Intron_number: 8-12/13
        Exon_number: 9-14/14
      T06H11.1d.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,3_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        Intron_number: 7-11/11
        Exon_number: 8-12/12
      T06H11.1a.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,3_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: T06H11.1a.1:c.1205-200_*187del
        cDNA_position: ?-1963
        Intron_number: 6-10/11
        Exon_number: 7-12/12
      T06H11.1c.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,3_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: T06H11.1c.1:c.1015+185_*187del
        cDNA_position: ?-1864
        Intron_number: 8-12/13
        Exon_number: 9-14/14
  Genetics: Interpolated_map_position: X 1.74712
  Reference: WBPaper00028462
  Method: Deletion_allele