WormBase Tree Display for Variation: WBVar00145015

WBVar00145015 Evidence: Paper_evidence: WBPaper00028462
  Name: Public_name: e2818
    Other_name: T06H11.1e.1:c.348-58_906del
      T06H11.1f.1:c.693-58_1251del
      T06H11.1d.1:c.573-58_1131del
      T06H11.1b.1:c.543-58_1090+117del
      T06H11.1a.1:c.657-58_1204+117del
      T06H11.1c.1:c.429-58_987del
      T06H11.1g.1:c.417-58_964+117del
    HGVSg: CHROMOSOME_X:g.10106711_10107528del
  Sequence_details: SMap: S_parent: Sequence: T06H11
    Flanking_sequences: atgtaactgtgtgtttgatttctttcaggg gaacgaacgaaattatggtttccgatcggt
    Mapping_target: T06H11
    Type_of_mutation: Deletion
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Laboratory: CB
    Status: Live
  Affects: Gene: WBGene00006792
    Transcript: T06H11.1b.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: T06H11.1b.1:c.543-58_1090+117del
        Intron_number: 5-8/12
        Exon_number: 6-8/13
      T06H11.1g.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: T06H11.1g.1:c.417-58_964+117del
        Intron_number: 4-7/12
        Exon_number: 5-7/13
      T06H11.1f.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: T06H11.1f.1:c.693-58_1251del
        cDNA_position: ?-1251
        CDS_position: ?-1251
        Protein_position: ?-417
        Intron_number: 6-9/14
        Exon_number: 7-10/15
      T06H11.1e.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: T06H11.1e.1:c.348-58_906del
        cDNA_position: ?-988
        CDS_position: ?-906
        Protein_position: ?-302
        Intron_number: 4-7/13
        Exon_number: 5-8/14
      T06H11.1d.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: T06H11.1d.1:c.573-58_1131del
        cDNA_position: ?-1131
        CDS_position: ?-1131
        Protein_position: ?-377
        Intron_number: 3-6/11
        Exon_number: 4-7/12
      T06H11.1a.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: T06H11.1a.1:c.657-58_1204+117del
        Intron_number: 3-6/11
        Exon_number: 4-6/12
      T06H11.1c.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: T06H11.1c.1:c.429-58_987del
        cDNA_position: ?-1077
        CDS_position: ?-987
        Protein_position: ?-329
        Intron_number: 4-7/13
        Exon_number: 5-8/14
  Genetics: Interpolated_map_position: X 1.74746
  Reference: WBPaper00028462
  Method: Deletion_allele