WormBase Tree Display for Variation: WBVar00145014

WBVar00145014 Evidence: Paper_evidence: WBPaper00028462
  Name: Public_name: e2817
    Other_name: T06H11.1d.1:c.1121_1440-17del
      T06H11.1a.1:c.1204+107_1485-17del
      T06H11.1f.1:c.1241_1560-17del
      T06H11.1c.1:c.977_1296-17del
      T06H11.1b.1:c.1090+107_1371-17del
      T06H11.1g.1:c.964+107_1245-17del
      T06H11.1e.1:c.896_1215-17del
    HGVSg: CHROMOSOME_X:g.10105544_10106721del
  Sequence_details: SMap: S_parent: Sequence: T06H11
    Flanking_sequences: aatcataattgaaatatcgtatcctaacag atttcgaatgttacagattcttaggaatga
    Mapping_target: T06H11
    Type_of_mutation: Deletion
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Laboratory: CB
    Status: Live
  Affects: Gene: WBGene00006792
    Transcript: T06H11.1b.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: T06H11.1b.1:c.1090+107_1371-17del
        Intron_number: 8-11/12
        Exon_number: 9-11/13
      T06H11.1g.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: T06H11.1g.1:c.964+107_1245-17del
        Intron_number: 7-10/12
        Exon_number: 8-10/13
      T06H11.1f.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: T06H11.1f.1:c.1241_1560-17del
        cDNA_position: 1241-?
        CDS_position: 1241-?
        Protein_position: 414-?
        Intron_number: 10-13/14
        Exon_number: 10-13/15
      T06H11.1e.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: T06H11.1e.1:c.896_1215-17del
        cDNA_position: 978-?
        CDS_position: 896-?
        Protein_position: 299-?
        Intron_number: 8-11/13
        Exon_number: 8-11/14
      T06H11.1d.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: T06H11.1d.1:c.1121_1440-17del
        cDNA_position: 1121-?
        CDS_position: 1121-?
        Protein_position: 374-?
        Intron_number: 7-10/11
        Exon_number: 7-10/12
      T06H11.1a.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: T06H11.1a.1:c.1204+107_1485-17del
        Intron_number: 6-9/11
        Exon_number: 7-9/12
      T06H11.1c.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: T06H11.1c.1:c.977_1296-17del
        cDNA_position: 1067-?
        CDS_position: 977-?
        Protein_position: 326-?
        Intron_number: 8-11/13
        Exon_number: 8-11/14
  Genetics: Interpolated_map_position: X 1.74722
  Reference: WBPaper00028462
  Method: Deletion_allele