WormBase Tree Display for Variation: WBVar00145013
expand all nodes | collapse all nodes | view schema
WBVar00145013 | Evidence | Paper_evidence | WBPaper00028462 | |||
---|---|---|---|---|---|---|
Name | Public_name | e2816 | ||||
Other_name | T06H11.1e.1:c.896-3_*147delinsTTT | |||||
T06H11.1c.1:c.977-3_*147delinsTTT | ||||||
T06H11.1g.1:c.964+104_*147delinsTTT | ||||||
T06H11.1a.1:c.1204+104_*147delinsTTT | ||||||
HGVSg | CHROMOSOME_X:g.10104952_10106724delinsAAA | |||||
Sequence_details | SMap | S_parent | Sequence | T06H11 | ||
Flanking_sequences | ttaaatcataattgaaatatcgtatcctaa | tttttctcttttatctttcattataatttt | ||||
Mapping_target | T06H11 | |||||
Type_of_mutation | Insertion | ttt | Paper_evidence | WBPaper00028462 | ||
Deletion | ||||||
SeqStatus | Sequenced | |||||
Variation_type | Allele | |||||
Origin | Species | Caenorhabditis elegans | ||||
Laboratory | CB | |||||
Status | Live | |||||
Affects | Gene | WBGene00006792 | ||||
Transcript | T06H11.1b.1 | VEP_consequence | splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,3_prime_UTR_variant,intron_variant | |||
VEP_impact | HIGH | |||||
Intron_number | 8-12/12 | |||||
Exon_number | 9-13/13 | |||||
T06H11.1g.1 | VEP_consequence | splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,3_prime_UTR_variant,intron_variant | ||||
VEP_impact | HIGH | |||||
HGVSc | T06H11.1g.1:c.964+104_*147delinsTTT | |||||
cDNA_position | ?-1825 | |||||
Intron_number | 7-11/12 | |||||
Exon_number | 8-13/13 | |||||
T06H11.1f.1 | VEP_consequence | splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,3_prime_UTR_variant,intron_variant | ||||
VEP_impact | HIGH | |||||
Intron_number | 9-14/14 | |||||
Exon_number | 10-15/15 | |||||
T06H11.1e.1 | VEP_consequence | splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,3_prime_UTR_variant,intron_variant | ||||
VEP_impact | HIGH | |||||
HGVSc | T06H11.1e.1:c.896-3_*147delinsTTT | |||||
cDNA_position | ?-1735 | |||||
Intron_number | 7-12/13 | |||||
Exon_number | 8-14/14 | |||||
T06H11.1d.1 | VEP_consequence | splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,3_prime_UTR_variant,intron_variant | ||||
VEP_impact | HIGH | |||||
Intron_number | 6-11/11 | |||||
Exon_number | 7-12/12 | |||||
T06H11.1a.1 | VEP_consequence | splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,3_prime_UTR_variant,intron_variant | ||||
VEP_impact | HIGH | |||||
HGVSc | T06H11.1a.1:c.1204+104_*147delinsTTT | |||||
cDNA_position | ?-1923 | |||||
Intron_number | 6-10/11 | |||||
Exon_number | 7-12/12 | |||||
T06H11.1c.1 | VEP_consequence | splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,3_prime_UTR_variant,intron_variant | ||||
VEP_impact | HIGH | |||||
HGVSc | T06H11.1c.1:c.977-3_*147delinsTTT | |||||
cDNA_position | ?-1824 | |||||
Intron_number | 7-12/13 | |||||
Exon_number | 8-14/14 | |||||
Genetics | Interpolated_map_position | X | 1.74715 | |||
Reference | WBPaper00028462 | |||||
Method | Deletion_and_insertion_allele |