WormBase Tree Display for Variation: WBVar00145012

WBVar00145012 Evidence: Paper_evidence: WBPaper00028462
  Name: Public_name: e2815
    Other_name: T06H11.1g.1:c.285+423_673+16del
      T06H11.1f.1:c.561+423_949+16del
      T06H11.1e.1:c.216+423_604+16del
      T06H11.1a.1:c.525+423_913+16del
      T06H11.1d.1:c.441+423_829+16del
      T06H11.1c.1:c.297+423_685+16del
      T06H11.1b.1:c.411+423_799+16del
    HGVSg: CHROMOSOME_X:g.10107198_10108760del
  Sequence_details: SMap: S_parent: Sequence: T06H11
    Flanking_sequences: aaagaacgcatgatcagcgctctcaaaata attcagaaataattaaaatttattattgtc
    Mapping_target: T06H11
    Type_of_mutation: Deletion
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Laboratory: CB
    Status: Live
  Affects: Gene: WBGene00195326
      WBGene00198156
      WBGene00006792
    Transcript: T06H11.1f.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: T06H11.1f.1:c.561+423_949+16del
        Intron_number: 5-7/14
        Exon_number: 6-7/15
      T06H11.1e.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: T06H11.1e.1:c.216+423_604+16del
        Intron_number: 3-5/13
        Exon_number: 4-5/14
      T06H11.1d.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: T06H11.1d.1:c.441+423_829+16del
        Intron_number: 2-4/11
        Exon_number: 3-4/12
      T06H11.6 VEP_consequence: transcript_ablation
        VEP_impact: HIGH
        Exon_number: 1/1
      T06H11.1b.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: T06H11.1b.1:c.411+423_799+16del
        Intron_number: 4-6/12
        Exon_number: 5-6/13
      T06H11.12 VEP_consequence: transcript_ablation
        VEP_impact: HIGH
        Exon_number: 1/1
      T06H11.1g.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: T06H11.1g.1:c.285+423_673+16del
        Intron_number: 3-5/12
        Exon_number: 4-5/13
      T06H11.1a.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: T06H11.1a.1:c.525+423_913+16del
        Intron_number: 2-4/11
        Exon_number: 3-4/12
      T06H11.1c.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: T06H11.1c.1:c.297+423_685+16del
        Intron_number: 3-5/13
        Exon_number: 4-5/14
  Genetics: Interpolated_map_position: X 1.74767
  Reference: WBPaper00028462
  Method: Deletion_allele