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WormBase Tree Display for Variation: WBVar00144953

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Name Class

WBVar00144953EvidencePaper_evidenceWBPaper00026735
WBPaper00032921
NamePublic_namee2725
Sequence_detailsType_of_mutationDeletion
SeqStatusPending_curation
Variation_typeAllele
OriginSpeciesCaenorhabditis elegans
LaboratoryCB
StatusLive
AffectsGeneWBGene00001174
DescriptionPhenotypeWBPhenotype:0000006Paper_evidenceWBPaper00026735
Curator_confirmedWBPerson48
Remarkstrong defectPaper_evidenceWBPaper00026735
Curator_confirmedWBPerson48
WBPhenotype:0001297Paper_evidenceWBPaper00026735
Curator_confirmedWBPerson48
WBPhenotype:0001413Paper_evidenceWBPaper00026735
Curator_confirmedWBPerson48
Phenotype_not_observedWBPhenotype:0001212Paper_evidenceWBPaper00026735
Curator_confirmedWBPerson48
RemarkBased on a comparison of bleach sensitivity with wild-type worms.Paper_evidenceWBPaper00026735
Curator_confirmedWBPerson48
WBPhenotype:0001411Paper_evidenceWBPaper00026735
Curator_confirmedWBPerson48
RemarkBased on lectin binding properties to the cuticlePaper_evidenceWBPaper00026735
Curator_confirmedWBPerson48
Phenotype_assayTreatmentTested the following fluorescein or rhodamine-conjugated lectins: WGA, SBA, TPA, PEA,, CON, LEA.Paper_evidenceWBPaper00026735
Curator_confirmedWBPerson48
WBPhenotype:0001415Paper_evidenceWBPaper00026735
Curator_confirmedWBPerson48
ReferenceWBPaper00026735
Remark5 kb is deleted, removing the entire egl-5 ORF along with at least 1 kb upstream and 1.5 kb downstream. It has not been possible to determine exact endpoints of the deletion, which may indicate a genomic rearrangement.
MethodDeletion_allele