WormBase Tree Display for Variation: WBVar00144933
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WBVar00144933 | Evidence | Paper_evidence | WBPaper00026735 | |||||
---|---|---|---|---|---|---|---|---|
Name | Public_name | e2702 | ||||||
Sequence_details | SeqStatus | Pending_curation | ||||||
Variation_type | Allele | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00004662 | |||||||
WBStrain00004767 | ||||||||
Laboratory | CB | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00044624 | ||||||
Isolation | Mutagen | EMS | ||||||
Description | Phenotype | WBPhenotype:0001014 | Person_evidence | WBPerson261 | ||||
Curator_confirmed | WBPerson48 | |||||||
Remark | M. nematophilum | Person_evidence | WBPerson261 | |||||
Curator_confirmed | WBPerson48 | |||||||
Penetrance | Complete | Person_evidence | WBPerson261 | |||||
Curator_confirmed | WBPerson48 | |||||||
Recessive | Person_evidence | WBPerson261 | ||||||
Curator_confirmed | WBPerson48 | |||||||
Variation_effect | Loss_of_function_undetermined_extent | Person_evidence | WBPerson261 | |||||
Curator_confirmed | WBPerson48 | |||||||
WBPhenotype:0001413 | Paper_evidence | WBPaper00026735 | ||||||
Curator_confirmed | WBPerson48 | |||||||
WBPhenotype:0001416 | Paper_evidence | WBPaper00026735 | ||||||
Curator_confirmed | WBPerson48 | |||||||
Remark | Based on vital dye staining for bacteria to reveal M. nematophilum; no rectal staining, indicating no adherence in the usual region. | Paper_evidence | WBPaper00026735 | |||||
Curator_confirmed | WBPerson48 | |||||||
Phenotype_not_observed | WBPhenotype:0001212 | Paper_evidence | WBPaper00026735 | |||||
Curator_confirmed | WBPerson48 | |||||||
Remark | Based on a comparison of bleach sensitivity with wild type worms. | Paper_evidence | WBPaper00026735 | |||||
Curator_confirmed | WBPerson48 | |||||||
WBPhenotype:0001411 | Paper_evidence | WBPaper00026735 | ||||||
Curator_confirmed | WBPerson48 | |||||||
Remark | Based on lectin binding properties to the cuticle | Paper_evidence | WBPaper00026735 | |||||
Curator_confirmed | WBPerson48 | |||||||
Phenotype_assay | Treatment | Tested the following fluorescein or rhodamine-conjugated lectins: WGA, SBA, TPA, PEA,, CON, LEA. | Paper_evidence | WBPaper00026735 | ||||
Curator_confirmed | WBPerson48 | |||||||
WBPhenotype:0001420 | Paper_evidence | WBPaper00029153 | ||||||
WBPaper00031925 | ||||||||
Curator_confirmed | WBPerson712 | |||||||
Remark (2) | ||||||||
Phenotype_assay | Treatment | Biofilm formation on adult worms was assessed for worms incubated 24-48 hours on the bacterial lawn. Alternatively, gravid adults were allowed to lay eggs on bacterial lawns for several hours, then removed and larvae were assessed for biofilm attachment the next day. | Paper_evidence | WBPaper00031925 | ||||
Curator_confirmed | WBPerson712 | |||||||
Reference | WBPaper00026735 | |||||||
WBPaper00031925 | ||||||||
WBPaper00029153 | ||||||||
Method | Allele |