WormBase Tree Display for Variation: WBVar00144888
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| WBVar00144888 | Evidence | Paper_evidence | WBPaper00025184 | ||||
|---|---|---|---|---|---|---|---|
| Name | Public_name | e2616 | |||||
| Other_name (12) | |||||||
| HGVSg | CHROMOSOME_V:g.11907223C>T | ||||||
| Sequence_details | SMap | S_parent | Sequence | R31 | |||
| Flanking_sequences | gatttactccaaaagcacgctgtactcgag | aggaaatgggactttacggaaataaggttt | |||||
| Mapping_target | R31 | ||||||
| Type_of_mutation | Substitution | c | t | Paper_evidence | WBPaper00025184 | ||
| SeqStatus | Sequenced | ||||||
| Variation_type | Allele | ||||||
| Origin | Species | Caenorhabditis elegans | |||||
| Laboratory | CB | ||||||
| Status | Live | ||||||
| Affects | Gene | WBGene00004855 | |||||
| Transcript | R31.1e.1 | VEP_consequence | stop_gained | ||||
| VEP_impact | HIGH | ||||||
| HGVSc | R31.1e.1:c.4810C>T | ||||||
| HGVSp | CE52987:p.Gln1604Ter | ||||||
| cDNA_position | 4810 | ||||||
| CDS_position | 4810 | ||||||
| Protein_position | 1604 | ||||||
| Exon_number | 7/17 | ||||||
| Codon_change | Cag/Tag | ||||||
| Amino_acid_change | Q/* | ||||||
| R31.1a.1 | VEP_consequence | stop_gained | |||||
| VEP_impact | HIGH | ||||||
| HGVSc | R31.1a.1:c.4810C>T | ||||||
| HGVSp | CE41581:p.Gln1604Ter | ||||||
| cDNA_position | 4925 | ||||||
| CDS_position | 4810 | ||||||
| Protein_position | 1604 | ||||||
| Exon_number | 8/20 | ||||||
| Codon_change | Cag/Tag | ||||||
| Amino_acid_change | Q/* | ||||||
| R31.1c.1 | VEP_consequence | stop_gained | |||||
| VEP_impact | HIGH | ||||||
| HGVSc | R31.1c.1:c.4252C>T | ||||||
| HGVSp | CE46009:p.Gln1418Ter | ||||||
| cDNA_position | 4252 | ||||||
| CDS_position | 4252 | ||||||
| Protein_position | 1418 | ||||||
| Exon_number | 4/15 | ||||||
| Codon_change | Cag/Tag | ||||||
| Amino_acid_change | Q/* | ||||||
| R31.1b.1 | VEP_consequence | stop_gained | |||||
| VEP_impact | HIGH | ||||||
| HGVSc | R31.1b.1:c.4501C>T | ||||||
| HGVSp | CE27773:p.Gln1501Ter | ||||||
| cDNA_position | 4501 | ||||||
| CDS_position | 4501 | ||||||
| Protein_position | 1501 | ||||||
| Exon_number | 6/17 | ||||||
| Codon_change | Cag/Tag | ||||||
| Amino_acid_change | Q/* | ||||||
| R31.1d.1 | VEP_consequence | stop_gained | |||||
| VEP_impact | HIGH | ||||||
| HGVSc | R31.1d.1:c.4501C>T | ||||||
| HGVSp | CE46252:p.Gln1501Ter | ||||||
| cDNA_position | 4743 | ||||||
| CDS_position | 4501 | ||||||
| Protein_position | 1501 | ||||||
| Exon_number | 7/18 | ||||||
| Codon_change | Cag/Tag | ||||||
| Amino_acid_change | Q/* | ||||||
| R31.1f.1 | VEP_consequence | stop_gained | |||||
| VEP_impact | HIGH | ||||||
| HGVSc | R31.1f.1:c.4252C>T | ||||||
| HGVSp | CE53064:p.Gln1418Ter | ||||||
| cDNA_position | 4252 | ||||||
| CDS_position | 4252 | ||||||
| Protein_position | 1418 | ||||||
| Exon_number | 4/14 | ||||||
| Codon_change | Cag/Tag | ||||||
| Amino_acid_change | Q/* | ||||||
| Genetics | Interpolated_map_position | V | 3.53921 | ||||
| Reference | WBPaper00025184 | ||||||
| Method | Substitution_allele |
