WormBase Tree Display for Variation: WBVar00144741
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| WBVar00144741 | Evidence | Paper_evidence | WBPaper00003757 | ||||
|---|---|---|---|---|---|---|---|
| Name | Public_name | e2321 | |||||
| Other_name | CE01560:p.Arg197Lys | ||||||
| F26C11.2.1:c.590G>A | |||||||
| HGVSg | CHROMOSOME_II:g.9898079C>T | ||||||
| Sequence_details | SMap | S_parent | Sequence | F26C11 | |||
| Flanking_sequences | gaggcaggcgaccaaatgcgaaatatccca | ggttcaggtaatttgtttcgtatagttttt | |||||
| Mapping_target | F26C11 | ||||||
| Type_of_mutation | Substitution | g | a | Paper_evidence | WBPaper00003757 | ||
| SeqStatus | Sequenced | ||||||
| Variation_type | Allele | ||||||
| Origin | Species | Caenorhabditis elegans | |||||
| Laboratory | CB | ||||||
| Status | Live | ||||||
| Affects | Gene | WBGene00006744 | |||||
| Transcript | F26C11.2.1 | VEP_consequence | missense_variant | ||||
| VEP_impact | MODERATE | ||||||
| SIFT | 0.01 | deleterious | |||||
| PolyPhen | 0.944 | possibly_damaging | |||||
| HGVSc | F26C11.2.1:c.590G>A | ||||||
| HGVSp | CE01560:p.Arg197Lys | ||||||
| cDNA_position | 709 | ||||||
| CDS_position | 590 | ||||||
| Protein_position | 197 | ||||||
| Exon_number | 6/8 | ||||||
| Codon_change | aGg/aAg | ||||||
| Amino_acid_change | R/K | ||||||
| Interactor | WBInteraction000556941 | ||||||
| Genetics | Interpolated_map_position | II | 1.76952 | ||||
| Description | Phenotype | WBPhenotype:0002514 | Paper_evidence | WBPaper00001502 | |||
| Curator_confirmed | WBPerson48777 | ||||||
| Reference | WBPaper00003757 | ||||||
| WBPaper00001502 | |||||||
| Method | Substitution_allele |
