WormBase Tree Display for Variation: WBVar00144647
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| WBVar00144647 | Evidence | Paper_evidence | WBPaper00033464 | ||||
|---|---|---|---|---|---|---|---|
| Name | Public_name | e2223 | |||||
| Other_name | Y48A6C.3.1:c.19T>A | ||||||
| CE19198:p.Cys7Ser | |||||||
| HGVSg | CHROMOSOME_III:g.11119181A>T | ||||||
| Sequence_details | SMap | S_parent | Sequence | Y48A6C | |||
| Flanking_sequences | agcgaaaaaagtccacaatctccacgtgggc | cgcaaaagtgtgagccattttatgttcaaa | |||||
| Mapping_target | Y48A6C | ||||||
| Type_of_mutation | Substitution | a | t | Curator_confirmed | WBPerson4055 | ||
| SeqStatus | Sequenced | ||||||
| Variation_type | Allele | ||||||
| Origin | Species | Caenorhabditis elegans | |||||
| Strain | WBStrain00007733 | ||||||
| Laboratory | CB | ||||||
| Status | Live | ||||||
| Affects | Gene | WBGene00012976 | |||||
| WBGene00305760 | |||||||
| Transcript | Y48A6C.12 | ||||||
| Y48A6C.3.1 (11) | |||||||
| Genetics | Interpolated_map_position | III | 6.05478 | ||||
| Mapping_data | In_pos_neg_data | 7377 | |||||
| Reference | WBPaper00033464 | ||||||
| Remark | Variation flanks and nucleotide change automatically updated to be on the positive strand to fix mapping and gff dumping issues. | ||||||
| [200224 mh6] reverse complemented/swapped the change and flanks to move the variation onto the plus strand | Curator_confirmed | WBPerson4055 | |||||
| Method | Substitution_allele |
