WormBase Tree Display for Variation: WBVar00144046
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WBVar00144046 | Evidence | Paper_evidence | WBPaper00001793 | ||||
---|---|---|---|---|---|---|---|
Name | Public_name | e1498 | |||||
Other_name | CE42646:p.Gln106Ter | ||||||
F01D4.6a.1:c.445C>T | |||||||
CE27422:p.Gln149Ter | |||||||
F01D4.6c.1:c.316C>T | |||||||
CE52302:p.Gln132Ter | |||||||
F01D4.6d.1:c.394C>T | |||||||
HGVSg | CHROMOSOME_IV:g.10460435G>A | ||||||
Sequence_details | SMap | S_parent | Sequence | F01D4 | |||
Flanking_sequences | accgtatcctgtatgtcacattatcctcct | aaatggatgacaacgcacctggagcaatag | |||||
Mapping_target | F01D4 | ||||||
Type_of_mutation | Substitution | C | T | Paper_evidence | WBPaper00001793 | ||
SeqStatus | Sequenced | ||||||
Variation_type | Allele | ||||||
Origin | Species | Caenorhabditis elegans | |||||
Laboratory | CB | ||||||
Status | Live | ||||||
Linked_to | WBVar01473870 | ||||||
Affects | Gene | WBGene00003167 | |||||
Transcript | F01D4.6d.1 | VEP_consequence | stop_gained | ||||
VEP_impact | HIGH | ||||||
HGVSc | F01D4.6d.1:c.394C>T | ||||||
HGVSp | CE52302:p.Gln132Ter | ||||||
cDNA_position | 491 | ||||||
CDS_position | 394 | ||||||
Protein_position | 132 | ||||||
Exon_number | 5/9 | ||||||
Codon_change | Caa/Taa | ||||||
Amino_acid_change | Q/* | ||||||
F01D4.6c.1 | VEP_consequence | stop_gained | |||||
VEP_impact | HIGH | ||||||
HGVSc | F01D4.6c.1:c.316C>T | ||||||
HGVSp | CE42646:p.Gln106Ter | ||||||
cDNA_position | 316 | ||||||
CDS_position | 316 | ||||||
Protein_position | 106 | ||||||
Exon_number | 3/6 | ||||||
Codon_change | Caa/Taa | ||||||
Amino_acid_change | Q/* | ||||||
F01D4.6a.1 | VEP_consequence | stop_gained | |||||
VEP_impact | HIGH | ||||||
HGVSc | F01D4.6a.1:c.445C>T | ||||||
HGVSp | CE27422:p.Gln149Ter | ||||||
cDNA_position | 546 | ||||||
CDS_position | 445 | ||||||
Protein_position | 149 | ||||||
Exon_number | 6/10 | ||||||
Codon_change | Caa/Taa | ||||||
Amino_acid_change | Q/* | ||||||
Genetics | Interpolated_map_position | IV | 4.59788 | ||||
Description | Phenotype (3) | ||||||
Reference | WBPaper00000502 | ||||||
WBPaper00001793 | |||||||
WBPaper00010529 | |||||||
Method | Substitution_allele |