WormBase Tree Display for Variation: WBVar00144032
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| WBVar00144032 | Name | Public_name | e1482 | ||||||
|---|---|---|---|---|---|---|---|---|---|
| Sequence_details | SeqStatus | Pending_curation | |||||||
| Variation_type | Allele | ||||||||
| Origin | Species | Caenorhabditis elegans | |||||||
| Strain | WBStrain00004344 | ||||||||
| WBStrain00030738 | |||||||||
| Laboratory | CB | ||||||||
| Status | Live | ||||||||
| Affects | Gene | WBGene00004860 | |||||||
| Interactor (87) | |||||||||
| Genetics | Mapping_data | In_2_point | 1534 | ||||||
| 3709 | |||||||||
| In_multi_point | 843 | ||||||||
| 1360 | |||||||||
| 1719 | |||||||||
| In_pos_neg_data | 3710 | ||||||||
| 3711 | |||||||||
| 3712 | |||||||||
| 3713 | |||||||||
| 3714 | |||||||||
| Description | Phenotype | WBPhenotype:0000324 | Person_evidence | WBPerson261 | |||||
| Curator_confirmed | WBPerson712 | ||||||||
| Remark | short adult and late larvae. e1482/Df similar | Person_evidence | WBPerson261 | ||||||
| Curator_confirmed | WBPerson712 | ||||||||
| Ease_of_scoring | ES2_Difficult_to_score | Person_evidence | WBPerson261 | ||||||
| Curator_confirmed | WBPerson712 | ||||||||
| Phenotype_not_observed | WBPhenotype:0000505 | Paper_evidence | WBPaper00001328 | ||||||
| Curator_confirmed | WBPerson712 | ||||||||
| Remark | Males are not Ram. | Paper_evidence | WBPaper00001328 | ||||||
| Curator_confirmed | WBPerson712 | ||||||||
| EQ_annotations | Anatomy_term | WBbt:0006941 | PATO:0000460 | Paper_evidence | WBPaper00001328 | ||||
| Curator_confirmed | WBPerson712 | ||||||||
| Life_stage | WBls:0000056 | PATO:0000460 | Paper_evidence | WBPaper00001328 | |||||
| Curator_confirmed | WBPerson712 | ||||||||
| Phenotype_assay | Temperature | 20C | Paper_evidence | WBPaper00001328 | |||||
| Curator_confirmed | WBPerson712 | ||||||||
| Genotype | him-5(e1490) | Paper_evidence | WBPaper00001328 | ||||||
| Curator_confirmed | WBPerson712 | ||||||||
| WBPhenotype:0001857 | Paper_evidence | WBPaper00031023 | |||||||
| Curator_confirmed | WBPerson2987 | ||||||||
| Remark | Abrogation of the TGF-beta pathway, as represented by sma-6(e1482), did not affect pgp-5 gene expression induction upon (Pseudomonas aeruginosa strain) PA14 infection. The fold increase in pgp-5 mRNA in sma-6(e1482), as determined by qRT-PCR, were not statistically different from wild type (Supplemental Results). | Paper_evidence | WBPaper00031023 | ||||||
| Curator_confirmed | WBPerson2987 | ||||||||
| Reference | WBPaper00026334 | ||||||||
| WBPaper00001328 | |||||||||
| WBPaper00015420 | |||||||||
| WBPaper00031023 | |||||||||
| WBPaper00061175 | |||||||||
| Remark | Created by WBPerson51134 from the NN_VFP_triage_pipeline | ||||||||
| Variation stub/paper connection generated from the May 2021 NN VFP dataset. | |||||||||
| Method | Allele |
