WormBase Tree Display for Variation: WBVar00143985
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WBVar00143985 | Evidence | Paper_evidence | WBPaper00003628 | ||||
---|---|---|---|---|---|---|---|
Name | Public_name | n1410 | |||||
Other_name | CE27761:p.Gln104Ter | ||||||
CE28236:p.Gln104Ter | |||||||
F54B11.3b.1:c.310C>T | |||||||
F54B11.3a.1:c.310C>T | |||||||
HGVSg | CHROMOSOME_X:g.13585583C>T | ||||||
Sequence_details | SMap | S_parent | Sequence | F54B11 | |||
Flanking_sequences | ggtggtactacttcaggatcactctctgag | aggagcactggtcagcggccagtctcagca | |||||
Mapping_target | F54B11 | ||||||
Type_of_mutation | Substitution | c | t | Paper_evidence | WBPaper00003628 | ||
SeqStatus | Sequenced | ||||||
Variation_type | Allele | ||||||
Origin | Species | Caenorhabditis elegans | |||||
Laboratory | CB | ||||||
Status | Live | ||||||
Affects | Gene | WBGene00006816 | |||||
Transcript | F54B11.3a.1 | VEP_consequence | stop_gained | ||||
VEP_impact | HIGH | ||||||
HGVSc | F54B11.3a.1:c.310C>T | ||||||
HGVSp | CE28236:p.Gln104Ter | ||||||
cDNA_position | 315 | ||||||
CDS_position | 310 | ||||||
Protein_position | 104 | ||||||
Exon_number | 3/12 | ||||||
Codon_change | Cag/Tag | ||||||
Amino_acid_change | Q/* | ||||||
F54B11.3b.1 | VEP_consequence | stop_gained | |||||
VEP_impact | HIGH | ||||||
HGVSc | F54B11.3b.1:c.310C>T | ||||||
HGVSp | CE27761:p.Gln104Ter | ||||||
cDNA_position | 315 | ||||||
CDS_position | 310 | ||||||
Protein_position | 104 | ||||||
Exon_number | 3/9 | ||||||
Codon_change | Cag/Tag | ||||||
Amino_acid_change | Q/* | ||||||
Genetics | Interpolated_map_position | X | 13.7262 | ||||
Mapping_data | In_2_point | 6104 | |||||
6162 | |||||||
In_multi_point | 179 | ||||||
180 | |||||||
793 | |||||||
1197 | |||||||
1369 | |||||||
2411 | |||||||
2417 | |||||||
In_pos_neg_data (14) | |||||||
Description | Phenotype (7) | ||||||
Reference | WBPaper00038282 | ||||||
WBPaper00039986 | |||||||
WBPaper00003628 | |||||||
WBPaper00016044 | |||||||
WBPaper00017147 | |||||||
WBPaper00015175 | |||||||
Method | Substitution_allele |