WormBase Tree Display for Variation: WBVar00143978
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WBVar00143978 | Evidence | Paper_evidence | WBPaper00001553 | ||||
---|---|---|---|---|---|---|---|
Name | Public_name | e1403 | |||||
Other_name | CE23546:p.Pro1411Leu | ||||||
CE43762:p.Pro323Leu | |||||||
C15F1.3c.1:c.968C>T | |||||||
C15F1.3a.1:c.4232C>T | |||||||
HGVSg | CHROMOSOME_II:g.6955815G>A | ||||||
Sequence_details | SMap | S_parent | Sequence | C15F1 | |||
Flanking_sequences | ctggacagctacctccaggacttcaagtac | ccgtcgaccgtacgattattatcacattac | |||||
Mapping_target | C15F1 | ||||||
Type_of_mutation | Substitution | c | t | Paper_evidence | WBPaper00001553 | ||
SeqStatus | Sequenced | ||||||
Variation_type | Allele | ||||||
Origin | Species | Caenorhabditis elegans | |||||
Strain | WBStrain00004611 | ||||||
Laboratory | CB | ||||||
Status | Live | ||||||
Affects | Gene | WBGene00006605 | |||||
Transcript | C15F1.3a.1 | VEP_consequence | missense_variant | ||||
VEP_impact | MODERATE | ||||||
SIFT | 0 | deleterious_low_confidence | |||||
PolyPhen | 0.999 | probably_damaging | |||||
HGVSc | C15F1.3a.1:c.4232C>T | ||||||
HGVSp | CE23546:p.Pro1411Leu | ||||||
cDNA_position | 4232 | ||||||
CDS_position | 4232 | ||||||
Protein_position | 1411 | ||||||
Exon_number | 23/24 | ||||||
Codon_change | cCc/cTc | ||||||
Amino_acid_change | P/L | ||||||
C15F1.3c.1 (12) | |||||||
Genetics | Interpolated_map_position | II | 0.150374 | ||||
Reference | WBPaper00001553 | ||||||
Method | Substitution_allele |