WormBase Tree Display for Variation: WBVar00143967
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| WBVar00143967 | Evidence | Paper_evidence | WBPaper00002847 | ||||||
|---|---|---|---|---|---|---|---|---|---|
| Name | Public_name | e1391 | |||||||
| Other_name (12) | |||||||||
| HGVSg | CHROMOSOME_III:g.3000534G>A | ||||||||
| Sequence_details | SMap | S_parent | Sequence | Y55D5A | |||||
| Flanking_sequences | agcgtatgatgcctgttcgatggatgtcac | cgagtcgttgaaagacggaaagtttgactc | |||||||
| Mapping_target | Y55D5A | ||||||||
| Type_of_mutation | Substitution | c | t | ||||||
| SeqStatus | Sequenced | ||||||||
| Variation_type | Allele | ||||||||
| Origin | Species | Caenorhabditis elegans | |||||||
| Strain | WBStrain00006382 | ||||||||
| Laboratory | CB | ||||||||
| Status | Live | ||||||||
| Affects | Gene | WBGene00000898 | |||||||
| Transcript | Y55D5A.5g.1 (12) | ||||||||
| Y55D5A.5e.1 (12) | |||||||||
| Y55D5A.5f.1 (12) | |||||||||
| Y55D5A.5a.1 (12) | |||||||||
| Y55D5A.5c.1 (12) | |||||||||
| Y55D5A.5d.1 (12) | |||||||||
| Interactor | WBInteraction000521005 | ||||||||
| WBInteraction000532935 | |||||||||
| Genetics | Interpolated_map_position | III | -8.12644 | ||||||
| Description | Phenotype | WBPhenotype:0000012 | Paper_evidence | WBPaper00002847 | |||||
| WBPaper00024451 | |||||||||
| Curator_confirmed | WBPerson712 | ||||||||
| WBPerson2987 | |||||||||
| Remark | This mutation causes moderate to strong dauer-constitutive phenotype, but is not as strong as nonconditional alleles, for example, mg43. | Paper_evidence | WBPaper00002847 | ||||||
| Curator_confirmed | WBPerson712 | ||||||||
| Figure 3A | Paper_evidence | WBPaper00024451 | |||||||
| Curator_confirmed | WBPerson2987 | ||||||||
| Penetrance | Complete | 100 | Paper_evidence | WBPaper00024451 | |||||
| Curator_confirmed | WBPerson2987 | ||||||||
| EQ_annotations | Life_stage | WBls:0000032 | PATO:0000460 | Paper_evidence | WBPaper00024451 | ||||
| Curator_confirmed | WBPerson2987 | ||||||||
| GO_term | GO:0040024 | PATO:0000460 | Paper_evidence | WBPaper00024451 | |||||
| Curator_confirmed | WBPerson2987 | ||||||||
| Temperature_sensitive | Heat_sensitive | 25 | Paper_evidence | WBPaper00002847 | |||||
| Curator_confirmed | WBPerson712 | ||||||||
| Phenotype_assay | Temperature | 25 | Paper_evidence | WBPaper00024451 | |||||
| Curator_confirmed | WBPerson2987 | ||||||||
| WBPhenotype:0000964 | Paper_evidence | WBPaper00037649 | |||||||
| Curator_confirmed | WBPerson712 | ||||||||
| Remark | strong resistance | Paper_evidence | WBPaper00037649 | ||||||
| Curator_confirmed | WBPerson712 | ||||||||
| WBPhenotype:0001639 | Paper_evidence | WBPaper00035327 | |||||||
| Curator_confirmed | WBPerson2021 | ||||||||
| Remark | Mutants of the insulin receptor daf-2 were deficient roamers in standard conditions | Paper_evidence | WBPaper00035327 | ||||||
| Curator_confirmed | WBPerson2021 | ||||||||
| WBPhenotype:0002541 | Paper_evidence | WBPaper00041495 | |||||||
| Curator_confirmed | WBPerson137 | ||||||||
| Reference | WBPaper00024451 | ||||||||
| WBPaper00041495 | |||||||||
| WBPaper00035327 | |||||||||
| WBPaper00037649 | |||||||||
| WBPaper00002847 | |||||||||
| Method | Substitution_allele |
