WormBase Tree Display for Variation: WBVar00143954

WBVar00143954 Evidence: Paper_evidence: WBPaper00025237
  Name: Public_name: e1377
    Other_name: CE38955:p.Trp149Ter
      F31F6.5.1:c.446G>A
    HGVSg: CHROMOSOME_X:g.14889428G>A
  Sequence_details: SMap: S_parent: Sequence: F31F6
    Flanking_sequences: attttcaggatctatgcctgagctacgatt ggtttgcggagccaacgagcatatccaaat
    Mapping_target: F31F6
    Type_of_mutation: Substitution: g a
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00004313
      WBStrain00004378
    Laboratory: CB
    Status: Live
  Affects: Gene: WBGene00000902
    Transcript: F31F6.5.1 VEP_consequence: stop_gained
        VEP_impact: HIGH
        HGVSc: F31F6.5.1:c.446G>A
        HGVSp: CE38955:p.Trp149Ter
        cDNA_position: 453
        CDS_position: 446
        Protein_position: 149
        Exon_number: 4/16
        Codon_change: tGg/tAg
        Amino_acid_change: W/*
    Interactor: WBInteraction000052365
      WBInteraction000501858
  Genetics: Interpolated_map_position: X 21.4994
    Mapping_data: In_2_point: 283
        419
        420
        421
      In_multi_point: 649
      In_pos_neg_data: 2161
        2169
        2228
  Description: Phenotype (19)
    Phenotype_not_observed: WBPhenotype:0000315 Paper_evidence: WBPaper00000932
        Curator_confirmed: WBPerson712
      WBPhenotype:0000398 Paper_evidence: WBPaper00000503
        Curator_confirmed: WBPerson712
      WBPhenotype:0000478 Paper_evidence: WBPaper00000932
        Curator_confirmed: WBPerson712
      WBPhenotype:0000505 Paper_evidence: WBPaper00000932
        Curator_confirmed: WBPerson712
        Remark: No FITC staining of ray sensilla. Paper_evidence: WBPaper00000932
            Curator_confirmed: WBPerson712
      WBPhenotype:0000843 Paper_evidence: WBPaper00000932
        Curator_confirmed: WBPerson712
        Remark: Mating efficiency 4; 30-100% of WT mating efficiency. Paper_evidence: WBPaper00000932
            Curator_confirmed: WBPerson712
        EQ_annotations: Life_stage: WBls:0000056 PATO:0000460 Paper_evidence: WBPaper00000932
                Curator_confirmed: WBPerson712
        Phenotype_assay: Genotype: him-5(e1490) Paper_evidence: WBPaper00000932
              Curator_confirmed: WBPerson712
      WBPhenotype:0001438 Paper_evidence: WBPaper00001786
        Curator_confirmed: WBPerson2021
        EQ_annotations: Life_stage: WBls:0000041 PATO:0000460 Paper_evidence: WBPaper00001786
                Curator_confirmed: WBPerson2021
      WBPhenotype:0001530 Paper_evidence: WBPaper00000932
        Curator_confirmed: WBPerson712
        Remark: No FITC staining of CEP. Paper_evidence: WBPaper00000932
            Curator_confirmed: WBPerson712
      WBPhenotype:0001535 Paper_evidence: WBPaper00000932
        Curator_confirmed: WBPerson712
        Remark: No FITC staining of ADE or PDE. Paper_evidence: WBPaper00000932
            Curator_confirmed: WBPerson712
  Reference (17)
  Method: Substitution_allele