WormBase Tree Display for Variation: WBVar00143936
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| WBVar00143936 | Evidence | Paper_evidence | WBPaper00003888 | ||
|---|---|---|---|---|---|
| Name | Public_name | e1348 | |||
| Other_name | CE18951:p.Gln160Ter | ||||
| T09A5.10.1:c.478C>T | |||||
| T09A5.10.2:c.478C>T | |||||
| HGVSg | CHROMOSOME_II:g.7861183C>T | ||||
| Sequence_details | SMap | S_parent | Sequence | T09A5 | |
| Flanking_sequences | tgggcatgtcttcggagagatgacgaagat | aggaagcatccagtggcttcaggactccga | |||
| Mapping_target | T09A5 | ||||
| Type_of_mutation | Substitution | c | t | ||
| SeqStatus | Sequenced | ||||
| Variation_type | Allele | ||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004404 | ||||
| WBStrain00034590 | |||||
| Laboratory | CB | ||||
| Status | Live | ||||
| Affects | Gene | WBGene00002994 | |||
| Transcript | T09A5.10.2 | VEP_consequence | stop_gained | ||
| VEP_impact | HIGH | ||||
| HGVSc | T09A5.10.2:c.478C>T | ||||
| HGVSp | CE18951:p.Gln160Ter | ||||
| cDNA_position | 479 | ||||
| CDS_position | 478 | ||||
| Protein_position | 160 | ||||
| Exon_number | 3/8 | ||||
| Codon_change | Cag/Tag | ||||
| Amino_acid_change | Q/* | ||||
| T09A5.10.1 | VEP_consequence | stop_gained | |||
| VEP_impact | HIGH | ||||
| HGVSc | T09A5.10.1:c.478C>T | ||||
| HGVSp | CE18951:p.Gln160Ter | ||||
| cDNA_position | 564 | ||||
| CDS_position | 478 | ||||
| Protein_position | 160 | ||||
| Exon_number | 3/8 | ||||
| Codon_change | Cag/Tag | ||||
| Amino_acid_change | Q/* | ||||
| Genetics | Interpolated_map_position | II | 0.586618 | ||
| Mapping_data | In_multi_point | 50 | |||
| 705 | |||||
| 711 | |||||
| In_pos_neg_data | 1359 | ||||
| 1391 | |||||
| 1465 | |||||
| 1473 | |||||
| 1480 | |||||
| 1484 | |||||
| 1497 | |||||
| 1505 | |||||
| 1509 | |||||
| Description (2) | |||||
| Reference | WBPaper00013668 | ||||
| WBPaper00015855 | |||||
| WBPaper00000008 | |||||
| WBPaper00015907 | |||||
| WBPaper00013666 | |||||
| Method | Substitution_allele |
