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WormBase Tree Display for Variation: WBVar00143929

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Name Class

WBVar00143929EvidencePaper_evidenceWBPaper00024641
NamePublic_namee1339
Other_nameT01C8.7.1:c.689G>A
CE39109:p.Gly230Glu
HGVSgCHROMOSOME_X:g.16806019C>T
Sequence_detailsSMapS_parentSequenceF41G4
Flanking_sequencesgtgatttatctggagcattttttgagccagatttgcaagatgcctttgtggaagccaagg
Mapping_targetF41G4
Type_of_mutationSubstitutiongaPaper_evidenceWBPaper00024641
SeqStatusSequenced
Variation_typeAllele
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004303
WBStrain00006192
LaboratoryCB
StatusLive
AffectsGeneWBGene00003168
TranscriptT01C8.7.1 (12)
GeneticsInterpolated_map_positionX24.0629
Mapping_dataIn_2_point172
In_multi_point277
DescriptionPhenotypeWBPhenotype:0000316Paper_evidenceWBPaper00000502
Person_evidenceWBPerson261
Curator_confirmedWBPerson712
RemarkMutants are often touch sensitive in the tailPaper_evidenceWBPaper00000502
Curator_confirmedWBPerson712
weak allele compared to u52, sometimes touch sensitive in tailPerson_evidenceWBPerson261
Curator_confirmedWBPerson712
PenetranceIncompletePaper_evidenceWBPaper00000502
Curator_confirmedWBPerson712
RecessivePaper_evidenceWBPaper00000502
Curator_confirmedWBPerson712
WBPhenotype:0000398Paper_evidenceWBPaper00031965
Curator_confirmedWBPerson712
RemarkAnimals fail to respond to light touch applied manually with an eyelash.Paper_evidenceWBPaper00031965
Curator_confirmedWBPerson712
WBPhenotype:0000850Paper_evidenceWBPaper00000502
Curator_confirmedWBPerson712
RecessivePaper_evidenceWBPaper00000502
Curator_confirmedWBPerson712
WBPhenotype:0001506Paper_evidenceWBPaper00049074
Curator_confirmedWBPerson6118
Remarkenhanced reversing rate off food and reduced reversing rate on food compared to N2Paper_evidenceWBPaper00049074
Curator_confirmedWBPerson6118
Phenotype_assayControl_strainWBStrain00000001Paper_evidenceWBPaper00049074
Curator_confirmedWBPerson6118
WBPhenotype:0001773Paper_evidenceWBPaper00031965
Curator_confirmedWBPerson712
RemarkAnimals do not show an increased speed when placed in liquid-filled, microfluidic chambers containing a square array of posts. Animals moved much more slowly compared to wild type in these chambers and failed to sustain the enhanced swimming pattern exhibited by wild-type animals.Paper_evidenceWBPaper00031965
Curator_confirmedWBPerson712
WBPhenotype:0002134Paper_evidenceWBPaper00039982
Curator_confirmedWBPerson712
RemarkThe fraction of mec-4(e1339) mutant animals that managed to escape from fungal traps of Drechslerella spp.: D. dactyloides, was drastically reduced compared to the wild-type fraction of escapers.Paper_evidenceWBPaper00039982
Curator_confirmedWBPerson712
Phenotype_not_observedWBPhenotype:0000643Paper_evidenceWBPaper00031965
Curator_confirmedWBPerson712
RemarkAnimals showed no differences in movement on agar compared to wild-type animals.Paper_evidenceWBPaper00031965
Curator_confirmedWBPerson712
WBPhenotype:0001700Paper_evidenceWBPaper00031965
Curator_confirmedWBPerson712
RemarkAnimals showed no differences in movement in bulk fluids compared to wild-type animals.Paper_evidenceWBPaper00031965
Curator_confirmedWBPerson712
ReferenceWBPaper00039982
WBPaper00000502
WBPaper00031965
WBPaper00049074
WBPaper00064927
MethodSubstitution_allele