WormBase Tree Display for Variation: WBVar00143923
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| WBVar00143923 | Evidence | Paper_evidence | WBPaper00000779 | ||||
|---|---|---|---|---|---|---|---|
| Name | Public_name | e1328 | |||||
| Other_name | CE09349:p.Gln1860Ter | ||||||
| F11C3.3.1:c.5578C>T | |||||||
| HGVSg | CHROMOSOME_I:g.14856547G>A | ||||||
| Sequence_details | SMap | S_parent | Sequence | F32A7 | |||
| Flanking_sequences | ggacgcgccgatagacgtgttcgtgagctt | aattccaggttgatgaggacaagaagaact | |||||
| Mapping_target | F32A7 | ||||||
| Type_of_mutation | Substitution | c | t | Paper_evidence | WBPaper00000779 | ||
| SeqStatus | Sequenced | ||||||
| Variation_type | Allele | ||||||
| Origin | Species | Caenorhabditis elegans | |||||
| Laboratory | CB | ||||||
| Status | Live | ||||||
| Affects | Gene | WBGene00006789 | |||||
| Transcript | F11C3.3.1 | VEP_consequence | stop_gained | ||||
| VEP_impact | HIGH | ||||||
| HGVSc | F11C3.3.1:c.5578C>T | ||||||
| HGVSp | CE09349:p.Gln1860Ter | ||||||
| cDNA_position | 5610 | ||||||
| CDS_position | 5578 | ||||||
| Protein_position | 1860 | ||||||
| Exon_number | 9/11 | ||||||
| Codon_change | Caa/Taa | ||||||
| Amino_acid_change | Q/* | ||||||
| Isolation | Mutagen | EMS | Paper_evidence | WBPaper00000779 | |||
| Genetics | Interpolated_map_position | I | 27.9599 | ||||
| Reference | WBPaper00014396 | ||||||
| Method | Substitution_allele |
