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WormBase Tree Display for Variation: WBVar00143855

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Name Class

WBVar00143855EvidencePaper_evidenceWBPaper00026868
NamePublic_namee1241
Other_nameCE24772:p.Ile112Lys
B0414.2.2:c.335T>A
B0414.2.3:c.335T>A
B0414.2.1:c.335T>A
HGVSgCHROMOSOME_I:g.5786129T>A
Sequence_detailsSMapS_parentSequenceB0414
Flanking_sequencescaggccgaaaattccatttgacaatcgttaacattcggcgccgatgatggtggccaccgt
Mapping_targetB0414
Type_of_mutationSubstitutiontaPaper_evidenceWBPaper00026868
SeqStatusSequenced
Variation_typeAllele
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004456
LaboratoryCB
StatusLive
AffectsGeneWBGene00004393
TranscriptB0414.2.3 (12)
B0414.2.2 (12)
B0414.2.1 (12)
InteractorWBInteraction000524834
GeneticsInterpolated_map_positionI0.447435
Mapping_dataIn_2_point329
In_multi_point205
DescriptionPhenotypeWBPhenotype:0000342Person_evidenceWBPerson261
Curator_confirmedWBPerson712
RemarkBursa often grossly distorted.Person_evidenceWBPerson261
Curator_confirmedWBPerson712
WBPhenotype:0000827Person_evidenceWBPerson261
Curator_confirmedWBPerson712
RemarkHermaphrodite gross phenotype normal; late hypodermal V divisions variably defective; very hard to score (ES1) in hermaphrodite.Person_evidenceWBPerson261
Curator_confirmedWBPerson712
WBPhenotype:0000828Person_evidenceWBPerson261
Curator_confirmedWBPerson712
RemarkLate hypodermal T divisions variably defective; very hard to score (ES1) in hermaphrodite.Person_evidenceWBPerson261
Curator_confirmedWBPerson712
WBPhenotype:0000938Person_evidenceWBPerson261
Curator_confirmedWBPerson712
RemarkAdult male has 6-18 missing copulatory rays as a result of variable failures of V lineages; easy to score (ES3) in adult male.Person_evidenceWBPerson261
Curator_confirmedWBPerson712
WBPhenotype:0000939Person_evidenceWBPerson261
Curator_confirmedWBPerson712
RemarkAdult male has 6-18 missing copulatory rays as a result of variable failures of T lineages; easy to score (ES3) in adult male.Person_evidenceWBPerson261
Curator_confirmedWBPerson712
WBPhenotype:0001225Paper_evidenceWBPaper00026860
Curator_confirmedWBPerson2987
Remark"We first examined the Psa phenotype in the T cells of hermaphrodites of all the rnt-1 alleles. A large proportion (51%-77%) of the mutants exhibited the Psa phenotype (Table 2)."Paper_evidenceWBPaper00026860
Curator_confirmedWBPerson2987
PenetranceIncomplete55Paper_evidenceWBPaper00026860
Curator_confirmedWBPerson2987
EQ_annotationsAnatomy_termWBbt:0005425PATO:0000460Paper_evidenceWBPaper00026860
Curator_confirmedWBPerson2987
Life_stageWBls:0000027PATO:0000460Paper_evidenceWBPaper00026860
Curator_confirmedWBPerson2987
Phenotype_assayTreatment"Psa phenotype (see Materials and methods) was scored during the L2 stage."Paper_evidenceWBPaper00026860
Curator_confirmedWBPerson2987
WBPhenotype:0001414Person_evidenceWBPerson261
Curator_confirmedWBPerson712
RemarkMating not or rarely successful (ME0/ME1).Person_evidenceWBPerson261
Curator_confirmedWBPerson712
WBPhenotype:0001509Person_evidenceWBPerson261
Curator_confirmedWBPerson712
RemarkAdult male has 6-18 missing copulatory rays.Person_evidenceWBPerson261
Curator_confirmedWBPerson712
WBPhenotype:0002211Paper_evidenceWBPaper00026860
Curator_confirmedWBPerson2987
Remark"We next performed phasmid dye-filling analysis on hermaphrodites from all the alleles. Again, a large proportion (46%-73%) of the mutants displayed the Dyf phenotype (Table 2)."Paper_evidenceWBPaper00026860
Curator_confirmedWBPerson2987
PenetranceIncomplete60Paper_evidenceWBPaper00026860
Curator_confirmedWBPerson2987
EQ_annotationsAnatomy_termWBbt:0005425PATO:0000460Paper_evidenceWBPaper00026860
Curator_confirmedWBPerson2987
Phenotype_not_observedWBPhenotype:0001025Person_evidenceWBPerson261
Curator_confirmedWBPerson712
RemarkHermaphrodite gross phenotype normal.Person_evidenceWBPerson261
Curator_confirmedWBPerson712
ReferenceWBPaper00026860
WBPaper00011437
MethodSubstitution_allele