WormBase Tree Display for Variation: WBVar00143854

WBVar00143854 Name: Public_name: e1240
  Sequence_details: SeqStatus: Pending_curation
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00004394
      WBStrain00004437
      WBStrain00006448
    Laboratory: CB
    Status: Live
  Affects: Gene: WBGene00003100
    Interactor (14)
  Genetics: Mapping_data: In_2_point: 337
      In_multi_point: 206
        1059
      In_pos_neg_data (15)
  Description: Phenotype: WBPhenotype:0000070 Paper_evidence: WBPaper00031953
        Person_evidence: WBPerson261
        Curator_confirmed: WBPerson712
        Remark: adult male tail morphology grossly abnormal, often with hermaphrodite tail spike Person_evidence: WBPerson261
            Curator_confirmed: WBPerson712
        EQ_annotations: Life_stage: WBls:0000056 PATO:0000460 Person_evidence: WBPerson261
                Curator_confirmed: WBPerson712
      WBPhenotype:0000445 Person_evidence: WBPerson261
        Curator_confirmed: WBPerson712
        Remark: adult male synthesizes yolk proteins Person_evidence: WBPerson261
            Curator_confirmed: WBPerson712
        EQ_annotations: Life_stage: WBls:0000056 PATO:0000460 Person_evidence: WBPerson261
                Curator_confirmed: WBPerson712
      WBPhenotype:0000827 Person_evidence: WBPerson261
        Curator_confirmed: WBPerson712
        Remark: V lineages abnormal, other defects Person_evidence: WBPerson261
            Curator_confirmed: WBPerson712
        EQ_annotations: Life_stage: WBls:0000056 PATO:0000460 Person_evidence: WBPerson261
                Curator_confirmed: WBPerson712
        Ease_of_scoring: ES3_Easy_to_score: Person_evidence: WBPerson261
            Curator_confirmed: WBPerson712
      WBPhenotype:0000889 Paper_evidence: WBPaper00031953
        Curator_confirmed: WBPerson712
        Remark: EFF-1::GFP levels were often reduced in the tail tips of mid-L4 males. Paper_evidence: WBPaper00031953
            Curator_confirmed: WBPerson712
        EQ_annotations: Anatomy_term: WBbt:0004381 PATO:0000460 Paper_evidence: WBPaper00031953
                Curator_confirmed: WBPerson712
            WBbt:0004380 PATO:0000460 Paper_evidence: WBPaper00031953
                Curator_confirmed: WBPerson712
            WBbt:0004378 PATO:0000460 Paper_evidence: WBPaper00031953
                Curator_confirmed: WBPerson712
            WBbt:0004377 PATO:0000460 Paper_evidence: WBPaper00031953
                Curator_confirmed: WBPerson712
          Life_stage: WBls:0000073 PATO:0000460 Paper_evidence: WBPaper00031953
                Curator_confirmed: WBPerson712
        Phenotype_assay: Genotype: fsEx135[EFF-1::GFP::outron::mCherry] Paper_evidence: WBPaper00031953
              Curator_confirmed: WBPerson712
      WBPhenotype:0001431 Paper_evidence: WBPaper00031953
        Curator_confirmed: WBPerson712
        Remark: 8% animals displayed short Lep tails (n=26). Paper_evidence: WBPaper00031953
            Curator_confirmed: WBPerson712
        Penetrance: Low: Paper_evidence: WBPaper00031953
              Curator_confirmed: WBPerson712
    Phenotype_not_observed: WBPhenotype:0000306 Paper_evidence: WBPaper00031953
        Curator_confirmed: WBPerson712
        Remark: dmd-3::YFP expression was expressed at wild-type levels in the tail tip. Paper_evidence: WBPaper00031953
            Curator_confirmed: WBPerson712
        Penetrance: Incomplete: Paper_evidence: WBPaper00031953
              Curator_confirmed: WBPerson712
        EQ_annotations: Anatomy_term: WBbt:0004381 PATO:0000460 Paper_evidence: WBPaper00031953
                Curator_confirmed: WBPerson712
            WBbt:0004380 PATO:0000460 Paper_evidence: WBPaper00031953
                Curator_confirmed: WBPerson712
            WBbt:0004378 PATO:0000460 Paper_evidence: WBPaper00031953
                Curator_confirmed: WBPerson712
            WBbt:0004377 PATO:0000460 Paper_evidence: WBPaper00031953
                Curator_confirmed: WBPerson712
          Life_stage: WBls:0000073 PATO:0000460 Paper_evidence: WBPaper00031953
                Curator_confirmed: WBPerson712
        Phenotype_assay: Genotype: fsEx154[DMD-3::YFP,cc::GFP] Paper_evidence: WBPaper00031953
              Curator_confirmed: WBPerson712
      WBPhenotype:0000702 Paper_evidence: WBPaper00031953
        Curator_confirmed: WBPerson712
        Remark: Cell fusion occurred normally in 100% of the animals (n=40), as assayed by the loss of cell boundaries (visualized by AJM::GFP). Paper_evidence: WBPaper00031953
            Curator_confirmed: WBPerson712
        EQ_annotations: Anatomy_term: WBbt:0004381 PATO:0000460 Paper_evidence: WBPaper00031953
                Curator_confirmed: WBPerson712
            WBbt:0004380 PATO:0000460 Paper_evidence: WBPaper00031953
                Curator_confirmed: WBPerson712
            WBbt:0004378 PATO:0000460 Paper_evidence: WBPaper00031953
                Curator_confirmed: WBPerson712
            WBbt:0004377 PATO:0000460 Paper_evidence: WBPaper00031953
                Curator_confirmed: WBPerson712
          Life_stage: WBls:0000073 PATO:0000460 Paper_evidence: WBPaper00031953
                Curator_confirmed: WBPerson712
        Phenotype_assay: Genotype: syIs78[AJM-1::GFP, unc-119(+)] Paper_evidence: WBPaper00031953
              Curator_confirmed: WBPerson712
      WBPhenotype:0001025 Person_evidence: WBPerson261
        Curator_confirmed: WBPerson712
        Remark: Hermaphrodite WT Person_evidence: WBPerson261
            Curator_confirmed: WBPerson712
  Reference: WBPaper00016427
    WBPaper00013709
    WBPaper00016477
    WBPaper00031953
    WBPaper00015487
    WBPaper00010536
    WBPaper00016592
    WBPaper00012447
    WBPaper00018400
  Method: Allele