WormBase Tree Display for Variation: WBVar00143790
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| WBVar00143790 | Evidence | Paper_evidence | WBPaper00006395 | ||||
|---|---|---|---|---|---|---|---|
| Name | Public_name | e1164 | |||||
| Other_name | T21D12.2b.1:c.460C>T | ||||||
| CE35021:p.Gln259Ter | |||||||
| T21D12.2a.1:c.775C>T | |||||||
| CE49091:p.Gln154Ter | |||||||
| HGVSg | CHROMOSOME_IV:g.258339G>A | ||||||
| Sequence_details | SMap | S_parent | Sequence | T21D12 | |||
| Flanking_sequences | gatgctggaaacccaggacttccaggacca | aaggaccaaaggtatgtttccgatatattt | |||||
| Mapping_target | T21D12 | ||||||
| Type_of_mutation | Substitution | c | t | Paper_evidence | WBPaper00006395 | ||
| SeqStatus | Sequenced | ||||||
| Variation_type | Allele | ||||||
| Origin | Species | Caenorhabditis elegans | |||||
| Laboratory | CB | ||||||
| Status | Live | ||||||
| Affects | Gene | WBGene00001071 | |||||
| Transcript | T21D12.2b.1 | VEP_consequence | stop_gained | ||||
| VEP_impact | HIGH | ||||||
| HGVSc | T21D12.2b.1:c.460C>T | ||||||
| HGVSp | CE49091:p.Gln154Ter | ||||||
| cDNA_position | 460 | ||||||
| CDS_position | 460 | ||||||
| Protein_position | 154 | ||||||
| Exon_number | 3/4 | ||||||
| Codon_change | Caa/Taa | ||||||
| Amino_acid_change | Q/* | ||||||
| T21D12.2a.1 | VEP_consequence | stop_gained | |||||
| VEP_impact | HIGH | ||||||
| HGVSc | T21D12.2a.1:c.775C>T | ||||||
| HGVSp | CE35021:p.Gln259Ter | ||||||
| cDNA_position | 776 | ||||||
| CDS_position | 775 | ||||||
| Protein_position | 259 | ||||||
| Exon_number | 4/6 | ||||||
| Codon_change | Caa/Taa | ||||||
| Amino_acid_change | Q/* | ||||||
| Genetics | Interpolated_map_position | IV | -26.7741 | ||||
| Reference | WBPaper00006395 | ||||||
| Method | Substitution_allele |
