WormBase Tree Display for Variation: WBVar00143775
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WBVar00143775 | Evidence | Paper_evidence | WBPaper00004282 | ||||
---|---|---|---|---|---|---|---|
Name | Public_name | e1146 | |||||
Other_name | F29C4.1b.1:c.724C>T | ||||||
CE17719:p.Gln242Ter | |||||||
F29C4.1a.1:c.724C>T | |||||||
CE31492:p.Gln242Ter | |||||||
HGVSg | CHROMOSOME_IV:g.135669C>T | ||||||
Sequence_details | SMap | S_parent | Sequence | F29C4 | |||
Flanking_sequences | agttctgtgccagaagttgctccaatcgag | agcagggaagcacaatgagcacatctgcag | |||||
Mapping_target | F29C4 | ||||||
Type_of_mutation | Substitution | c | t | Paper_evidence | WBPaper00004282 | ||
SeqStatus | Sequenced | ||||||
Variation_type | Allele | ||||||
Origin | Species | Caenorhabditis elegans | |||||
Strain | WBStrain00004361 | ||||||
Laboratory | CB | ||||||
Status | Live | ||||||
Affects | Gene | WBGene00000897 | |||||
Transcript | F29C4.1b.1 | VEP_consequence | stop_gained | ||||
VEP_impact | HIGH | ||||||
HGVSc | F29C4.1b.1:c.724C>T | ||||||
HGVSp | CE31492:p.Gln242Ter | ||||||
cDNA_position | 724 | ||||||
CDS_position | 724 | ||||||
Protein_position | 242 | ||||||
Exon_number | 5/9 | ||||||
Codon_change | Cag/Tag | ||||||
Amino_acid_change | Q/* | ||||||
F29C4.1a.1 | VEP_consequence | stop_gained | |||||
VEP_impact | HIGH | ||||||
HGVSc | F29C4.1a.1:c.724C>T | ||||||
HGVSp | CE17719:p.Gln242Ter | ||||||
cDNA_position | 759 | ||||||
CDS_position | 724 | ||||||
Protein_position | 242 | ||||||
Exon_number | 6/11 | ||||||
Codon_change | Cag/Tag | ||||||
Amino_acid_change | Q/* | ||||||
Genetics | Interpolated_map_position | IV | -26.9033 | ||||
Reference | WBPaper00004282 | ||||||
Method | Substitution_allele |