WormBase Tree Display for Variation: WBVar00143737
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| WBVar00143737 | Evidence | Paper_evidence | WBPaper00001553 | ||||
|---|---|---|---|---|---|---|---|
| Name | Public_name | e1095 | |||||
| Other_name | C15F1.3c.1:c.604C>T | ||||||
| CE23546:p.Gln1290Ter | |||||||
| CE43762:p.Gln202Ter | |||||||
| C15F1.3a.1:c.3868C>T | |||||||
| HGVSg | CHROMOSOME_II:g.6956179G>A | ||||||
| Sequence_details | SMap | S_parent | Sequence | C15F1 | |||
| Flanking_sequences | tctcgaaacattgaaaagatgaagaagtcg | aagaaaatttggacaaagaaaagagtgaag | |||||
| Mapping_target | C15F1 | ||||||
| Type_of_mutation | Substitution | c | t | Paper_evidence | WBPaper00001553 | ||
| SeqStatus | Sequenced | ||||||
| Variation_type | Allele | ||||||
| Origin | Species | Caenorhabditis elegans | |||||
| Strain | WBStrain00004405 | ||||||
| WBStrain00004576 | |||||||
| WBStrain00004579 | |||||||
| WBStrain00004581 | |||||||
| Laboratory | CB | ||||||
| Status | Live | ||||||
| Affects | Gene | WBGene00006605 | |||||
| Transcript | C15F1.3a.1 | VEP_consequence | stop_gained | ||||
| VEP_impact | HIGH | ||||||
| HGVSc | C15F1.3a.1:c.3868C>T | ||||||
| HGVSp | CE23546:p.Gln1290Ter | ||||||
| cDNA_position | 3868 | ||||||
| CDS_position | 3868 | ||||||
| Protein_position | 1290 | ||||||
| Exon_number | 23/24 | ||||||
| Codon_change | Caa/Taa | ||||||
| Amino_acid_change | Q/* | ||||||
| C15F1.3c.1 | VEP_consequence | stop_gained | |||||
| VEP_impact | HIGH | ||||||
| HGVSc | C15F1.3c.1:c.604C>T | ||||||
| HGVSp | CE43762:p.Gln202Ter | ||||||
| cDNA_position | 604 | ||||||
| CDS_position | 604 | ||||||
| Protein_position | 202 | ||||||
| Exon_number | 3/3 | ||||||
| Codon_change | Caa/Taa | ||||||
| Amino_acid_change | Q/* | ||||||
| Interactor | WBInteraction000052137 | ||||||
| WBInteraction000052144 | |||||||
| WBInteraction000052147 | |||||||
| WBInteraction000052158 | |||||||
| WBInteraction000052159 | |||||||
| WBInteraction000052160 | |||||||
| WBInteraction000052161 | |||||||
| WBInteraction000052162 | |||||||
| WBInteraction000524196 | |||||||
| Genetics | Interpolated_map_position | II | 0.150823 | ||||
| Mapping_data | In_multi_point | 843 | |||||
| 1471 | |||||||
| 1473 | |||||||
| 2311 | |||||||
| Description (2) | |||||||
| Reference (13) | |||||||
| Method | Substitution_allele |
