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WormBase Tree Display for Variation: WBVar00143362

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Name Class

WBVar00143362EvidencePaper_evidenceWBPaper00003576
NamePublic_namee641
Other_name (13)
HGVSgCHROMOSOME_III:g.10528005G>A
Sequence_detailsSMapS_parentSequenceT21C12
Flanking_sequencestacgagacgaaagatatcgactactattggggaagaagcggactgatttggagataacgg
Mapping_targetT21C12
Type_of_mutationSubstitutiongaPaper_evidenceWBPaper00003576
SeqStatusSequenced
Variation_typeAllele
OriginSpeciesCaenorhabditis elegans
LaboratoryCB
StatusLive
AffectsGeneWBGene00006784
TranscriptT21C12.1k.1 (12)
T21C12.1m.1 (12)
T21C12.1c.1 (12)
T21C12.1e.1 (12)
T21C12.1c.2 (12)
T21C12.1o.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScT21C12.1o.1:c.59-2581G>A
Intron_number1/5
T21C12.1d.1 (12)
T21C12.1f.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScT21C12.1f.1:c.563-2581G>A
Intron_number6/11
GeneticsInterpolated_map_positionIII3.36757
DescriptionPhenotypeWBPhenotype:0000563Paper_evidenceWBPaper00003576
Person_evidenceWBPerson39
Curator_confirmedWBPerson48
PenetranceCompletePaper_evidenceWBPaper00003576
Person_evidenceWBPerson39
Curator_confirmedWBPerson48
RecessivePaper_evidenceWBPaper00003576
Person_evidenceWBPerson39
Curator_confirmedWBPerson48
Variation_effectNullPaper_evidenceWBPaper00003576
Person_evidenceWBPerson39
Curator_confirmedWBPerson48
ReferenceWBPaper00003576
Remarkaffects only UNC-49B
MethodSubstitution_allele