WormBase Tree Display for Variation: WBVar00143220
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WBVar00143220 | Evidence | Paper_evidence | WBPaper00040589 | ||
---|---|---|---|---|---|
Name | Public_name | e450 | |||
Other_name (18) | |||||
HGVSg | CHROMOSOME_I:g.7435173C>T | ||||
Sequence_details (5) | |||||
Variation_type | Allele | ||||
Origin | Species | Caenorhabditis elegans | |||
Strain (205) | |||||
Laboratory | CB | ||||
Status | Live | ||||
Affects | Gene | WBGene00006752 | |||
Transcript | ZK524.2e.1 | VEP_consequence | stop_gained | ||
VEP_impact | HIGH | ||||
HGVSc | ZK524.2e.1:c.1768C>T | ||||
HGVSp | CE34626:p.Gln590Ter | ||||
cDNA_position | 1768 | ||||
CDS_position | 1768 | ||||
Protein_position | 590 | ||||
Exon_number | 13/30 | ||||
Codon_change | Cag/Tag | ||||
Amino_acid_change | Q/* | ||||
ZK524.2c.1 | VEP_consequence | stop_gained | |||
VEP_impact | HIGH | ||||
HGVSc | ZK524.2c.1:c.745C>T | ||||
HGVSp | CE34624:p.Gln249Ter | ||||
cDNA_position | 745 | ||||
CDS_position | 745 | ||||
Protein_position | 249 | ||||
Exon_number | 5/22 | ||||
Codon_change | Cag/Tag | ||||
Amino_acid_change | Q/* | ||||
ZK524.2f.1 | VEP_consequence | stop_gained | |||
VEP_impact | HIGH | ||||
HGVSc | ZK524.2f.1:c.1777C>T | ||||
HGVSp | CE43866:p.Gln593Ter | ||||
cDNA_position | 1777 | ||||
CDS_position | 1777 | ||||
Protein_position | 593 | ||||
Exon_number | 13/30 | ||||
Codon_change | Cag/Tag | ||||
Amino_acid_change | Q/* | ||||
ZK524.2j.1 | VEP_consequence | stop_gained | |||
VEP_impact | HIGH | ||||
HGVSc | ZK524.2j.1:c.1732C>T | ||||
HGVSp | CE51718:p.Gln578Ter | ||||
cDNA_position | 1732 | ||||
CDS_position | 1732 | ||||
Protein_position | 578 | ||||
Exon_number | 13/29 | ||||
Codon_change | Cag/Tag | ||||
Amino_acid_change | Q/* | ||||
ZK524.2k.1 | VEP_consequence | stop_gained | |||
VEP_impact | HIGH | ||||
HGVSc | ZK524.2k.1:c.1723C>T | ||||
HGVSp | CE51726:p.Gln575Ter | ||||
cDNA_position | 1723 | ||||
CDS_position | 1723 | ||||
Protein_position | 575 | ||||
Exon_number | 13/29 | ||||
Codon_change | Cag/Tag | ||||
Amino_acid_change | Q/* | ||||
ZK524.2a.1 | VEP_consequence | stop_gained | |||
VEP_impact | HIGH | ||||
HGVSc | ZK524.2a.1:c.1768C>T | ||||
HGVSp | CE15371:p.Gln590Ter | ||||
cDNA_position | 1768 | ||||
CDS_position | 1768 | ||||
Protein_position | 590 | ||||
Exon_number | 13/30 | ||||
Codon_change | Cag/Tag | ||||
Amino_acid_change | Q/* | ||||
ZK524.2i.1 | VEP_consequence | stop_gained | |||
VEP_impact | HIGH | ||||
HGVSc | ZK524.2i.1:c.1777C>T | ||||
HGVSp | CE32552:p.Gln593Ter | ||||
cDNA_position | 1777 | ||||
CDS_position | 1777 | ||||
Protein_position | 593 | ||||
Exon_number | 13/29 | ||||
Codon_change | Cag/Tag | ||||
Amino_acid_change | Q/* | ||||
ZK524.2d.1 | VEP_consequence | stop_gained | |||
VEP_impact | HIGH | ||||
HGVSc | ZK524.2d.1:c.1768C>T | ||||
HGVSp | CE34625:p.Gln590Ter | ||||
cDNA_position | 1768 | ||||
CDS_position | 1768 | ||||
Protein_position | 590 | ||||
Exon_number | 13/31 | ||||
Codon_change | Cag/Tag | ||||
Amino_acid_change | Q/* | ||||
ZK524.2h.1 | VEP_consequence | stop_gained | |||
VEP_impact | HIGH | ||||
HGVSc | ZK524.2h.1:c.745C>T | ||||
HGVSp | CE51759:p.Gln249Ter | ||||
cDNA_position | 745 | ||||
CDS_position | 745 | ||||
Protein_position | 249 | ||||
Exon_number | 5/21 | ||||
Codon_change | Cag/Tag | ||||
Amino_acid_change | Q/* | ||||
Interactor | WBInteraction000518876 | ||||
WBInteraction000519037 | |||||
WBInteraction000536820 | |||||
WBInteraction000536821 | |||||
Genetics | Interpolated_map_position | I | 2.07407 | ||
Mapping_data | In_2_point (14) | ||||
In_multi_point (75) | |||||
In_pos_neg_data (45) | |||||
Description (2) | |||||
Reference (17) | |||||
Method | Substitution_allele |